7 items (Nicotiana sylvestris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104218001	Uncharacterized protein LOC104218001. (823 aa)
	LOC104222006	Uncharacterized protein At3g61260. (356 aa)
	LOC104223504	Trihelix transcription factor GT-2-like. (331 aa)
	LOC104230469	Uncharacterized protein LOC104230469 isoform X1. (310 aa)
	LOC104238752	Uncharacterized protein LOC104238752. (990 aa)
	LOC104240900	Protein TIME FOR COFFEE isoform X1. (1644 aa)
	LOC104248419	Uncharacterized protein LOC104248419 isoform X1. (603 aa)

Your Current Organism:

Nicotiana sylvestris

NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC104218001	LOC104222006	A0A1U7VWA6	A0A1U7VYP2	Uncharacterized protein LOC104218001.	Uncharacterized protein At3g61260.	0.467
LOC104218001	LOC104223504	A0A1U7VWA6	A0A1U7VZR6	Uncharacterized protein LOC104218001.	Trihelix transcription factor GT-2-like.	0.489
LOC104218001	LOC104230469	A0A1U7VWA6	A0A1U7X3Z7	Uncharacterized protein LOC104218001.	Uncharacterized protein LOC104230469 isoform X1.	0.431
LOC104218001	LOC104240900	A0A1U7VWA6	A0A1U7XWW0	Uncharacterized protein LOC104218001.	Protein TIME FOR COFFEE isoform X1.	0.457
LOC104218001	LOC104248419	A0A1U7VWA6	A0A1U7YLV5	Uncharacterized protein LOC104218001.	Uncharacterized protein LOC104248419 isoform X1.	0.513
LOC104222006	LOC104218001	A0A1U7VYP2	A0A1U7VWA6	Uncharacterized protein At3g61260.	Uncharacterized protein LOC104218001.	0.467
LOC104222006	LOC104223504	A0A1U7VYP2	A0A1U7VZR6	Uncharacterized protein At3g61260.	Trihelix transcription factor GT-2-like.	0.435
LOC104222006	LOC104230469	A0A1U7VYP2	A0A1U7X3Z7	Uncharacterized protein At3g61260.	Uncharacterized protein LOC104230469 isoform X1.	0.453
LOC104222006	LOC104238752	A0A1U7VYP2	A0A1U7XHJ4	Uncharacterized protein At3g61260.	Uncharacterized protein LOC104238752.	0.441
LOC104222006	LOC104240900	A0A1U7VYP2	A0A1U7XWW0	Uncharacterized protein At3g61260.	Protein TIME FOR COFFEE isoform X1.	0.436
LOC104222006	LOC104248419	A0A1U7VYP2	A0A1U7YLV5	Uncharacterized protein At3g61260.	Uncharacterized protein LOC104248419 isoform X1.	0.526
LOC104223504	LOC104218001	A0A1U7VZR6	A0A1U7VWA6	Trihelix transcription factor GT-2-like.	Uncharacterized protein LOC104218001.	0.489
LOC104223504	LOC104222006	A0A1U7VZR6	A0A1U7VYP2	Trihelix transcription factor GT-2-like.	Uncharacterized protein At3g61260.	0.435
LOC104223504	LOC104248419	A0A1U7VZR6	A0A1U7YLV5	Trihelix transcription factor GT-2-like.	Uncharacterized protein LOC104248419 isoform X1.	0.456
LOC104230469	LOC104218001	A0A1U7X3Z7	A0A1U7VWA6	Uncharacterized protein LOC104230469 isoform X1.	Uncharacterized protein LOC104218001.	0.431
LOC104230469	LOC104222006	A0A1U7X3Z7	A0A1U7VYP2	Uncharacterized protein LOC104230469 isoform X1.	Uncharacterized protein At3g61260.	0.453
LOC104230469	LOC104238752	A0A1U7X3Z7	A0A1U7XHJ4	Uncharacterized protein LOC104230469 isoform X1.	Uncharacterized protein LOC104238752.	0.494
LOC104230469	LOC104240900	A0A1U7X3Z7	A0A1U7XWW0	Uncharacterized protein LOC104230469 isoform X1.	Protein TIME FOR COFFEE isoform X1.	0.504
LOC104230469	LOC104248419	A0A1U7X3Z7	A0A1U7YLV5	Uncharacterized protein LOC104230469 isoform X1.	Uncharacterized protein LOC104248419 isoform X1.	0.484
LOC104238752	LOC104222006	A0A1U7XHJ4	A0A1U7VYP2	Uncharacterized protein LOC104238752.	Uncharacterized protein At3g61260.	0.441