32 items (Nicotiana sylvestris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104213129	Uncharacterized protein LOC104213129. (627 aa)
	LOC104211189	WUSCHEL-related homeobox 2. (246 aa)
	LOC104212985	Transcription factor MYB1R1-like. (300 aa)
	LOC104213403	Protein RADIALIS-like 1. (89 aa)
	LOC104217735	Transcription factor MYB1R1-like. (233 aa)
	LOC104220360	UPF0505 protein C16orf62 homolog isoform X1. (580 aa)
	LOC104219851	Uncharacterized protein LOC104219851 isoform X1. (468 aa)
	LOC104217790	Down syndrome critical region protein 3 isoform X1. (368 aa)
	LOC104217904	Transcription factor DIVARICATA-like. (245 aa)
	LOC104218360	Interferon-related developmental regulator 1-like. (442 aa)
	LOC104218527	Transcription factor DIVARICATA-like. (275 aa)
	LOC104222553	RING finger and transmembrane domain-containing protein 1 isoform X1. (479 aa)
	LOC104227889	Transcription factor MYB1R1-like. (267 aa)
	LOC104226078	Protein REVEILLE 6 isoform X1. (351 aa)
	LOC104231372	Protein REVEILLE 1-like isoform X1. (467 aa)
	LOC104230088	RING finger and transmembrane domain-containing protein 2-like isoform X1. (423 aa)
	LOC104230415	Coiled-coil domain-containing protein 22 isoform X1. (519 aa)
	LOC104233140	Transcription factor DIVARICATA-like. (313 aa)
	LOC104232385	RING finger and transmembrane domain-containing protein 1-like. (182 aa)
	LOC104238282	Protein REVEILLE 1-like isoform X1. (484 aa)
	LOC104236383	Coiled-coil domain-containing protein 93 isoform X1. (243 aa)
	LOC104234785	Transcription factor DIVARICATA-like. (283 aa)
	LOC104240036	Uncharacterized protein LOC104240036. (450 aa)
	LOC104242020	Uncharacterized protein LOC104242020 isoform X1. (140 aa)
	LOC104242152	Transcription factor DIVARICATA-like. (174 aa)
	LOC104239942	Uncharacterized protein LOC104239942. (205 aa)
	LOC104245196	Phosphatidylinositol 4-kinase gamma 8-like. (571 aa)
	LOC104247788	Transcription factor DIVARICATA-like. (282 aa)
	LOC104248229	UPF0505 protein C16orf62 homolog. (458 aa)
	LOC104248350	Protein REVEILLE 6. (308 aa)
	LOC104248359	Myb-like protein J. (270 aa)
	LOC104248313	Transcription factor MYB1R1-like. (290 aa)

Your Current Organism:

Nicotiana sylvestris

NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC104211189	LOC104212985	A0A1U7V8C9	A0A1U7VEB2	WUSCHEL-related homeobox 2.	Transcription factor MYB1R1-like.	0.450
LOC104211189	LOC104227889	A0A1U7V8C9	A0A1U7WF24	WUSCHEL-related homeobox 2.	Transcription factor MYB1R1-like.	0.495
LOC104211189	LOC104234785	A0A1U7V8C9	A0A1U7XID9	WUSCHEL-related homeobox 2.	Transcription factor DIVARICATA-like.	0.444
LOC104211189	LOC104239942	A0A1U7V8C9	A0A1U7Y2J4	WUSCHEL-related homeobox 2.	Uncharacterized protein LOC104239942.	0.495
LOC104211189	LOC104247788	A0A1U7V8C9	A0A1U7YDJ4	WUSCHEL-related homeobox 2.	Transcription factor DIVARICATA-like.	0.444
LOC104211189	LOC104248313	A0A1U7V8C9	A0A1U7YVS4	WUSCHEL-related homeobox 2.	Transcription factor MYB1R1-like.	0.450
LOC104212985	LOC104211189	A0A1U7VEB2	A0A1U7V8C9	Transcription factor MYB1R1-like.	WUSCHEL-related homeobox 2.	0.450
LOC104212985	LOC104230415	A0A1U7VEB2	A0A1U7WW32	Transcription factor MYB1R1-like.	Coiled-coil domain-containing protein 22 isoform X1.	0.503
LOC104213403	LOC104230415	A0A1U7VFU9	A0A1U7WW32	Protein RADIALIS-like 1.	Coiled-coil domain-containing protein 22 isoform X1.	0.503
LOC104217735	LOC104230415	A0A1U7VJ54	A0A1U7WW32	Transcription factor MYB1R1-like.	Coiled-coil domain-containing protein 22 isoform X1.	0.503
LOC104217790	LOC104220360	A0A1U7VVJ1	A0A1U7VNN4	Down syndrome critical region protein 3 isoform X1.	UPF0505 protein C16orf62 homolog isoform X1.	0.807
LOC104217790	LOC104230415	A0A1U7VVJ1	A0A1U7WW32	Down syndrome critical region protein 3 isoform X1.	Coiled-coil domain-containing protein 22 isoform X1.	0.941
LOC104217790	LOC104236383	A0A1U7VVJ1	A0A1U7XG20	Down syndrome critical region protein 3 isoform X1.	Coiled-coil domain-containing protein 93 isoform X1.	0.939
LOC104217790	LOC104242020	A0A1U7VVJ1	A0A1U7XTD0	Down syndrome critical region protein 3 isoform X1.	Uncharacterized protein LOC104242020 isoform X1.	0.638
LOC104217790	LOC104248229	A0A1U7VVJ1	A0A1U7YL87	Down syndrome critical region protein 3 isoform X1.	UPF0505 protein C16orf62 homolog.	0.784
LOC104217904	LOC104230415	A0A1U7VVW5	A0A1U7WW32	Transcription factor DIVARICATA-like.	Coiled-coil domain-containing protein 22 isoform X1.	0.503
LOC104218360	LOC104230415	A0A1U7VXN3	A0A1U7WW32	Interferon-related developmental regulator 1-like.	Coiled-coil domain-containing protein 22 isoform X1.	0.772
LOC104218360	LOC104236383	A0A1U7VXN3	A0A1U7XG20	Interferon-related developmental regulator 1-like.	Coiled-coil domain-containing protein 93 isoform X1.	0.519
LOC104218527	LOC104230415	A0A1U7VZB7	A0A1U7WW32	Transcription factor DIVARICATA-like.	Coiled-coil domain-containing protein 22 isoform X1.	0.503
LOC104219851	LOC104230415	A0A1U7VR70	A0A1U7WW32	Uncharacterized protein LOC104219851 isoform X1.	Coiled-coil domain-containing protein 22 isoform X1.	0.503