12 items (Nicotiana sylvestris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104210355	Zinc finger matrin-type protein 2-like isoform X1. (202 aa)
	LOC104212655	Uncharacterized protein LOC104212655. (919 aa)
	LOC104211195	Microfibrillar-associated protein 1-like. (430 aa)
	LOC104213602	pre-mRNA-splicing factor 38-like. (400 aa)
	LOC104220904	Suppressor of mec-8 and unc-52 protein homolog 1-like. (514 aa)
	LOC104226108	Putative nuclear matrix constituent protein 1-like protein. (938 aa)
	LOC104227356	pre-mRNA-splicing factor 38. (382 aa)
	LOC104230192	Ubiquitin-like protein 5. (73 aa)
	LOC104233325	Suppressor of mec-8 and unc-52 protein homolog 2 isoform X1. (558 aa)
	LOC104240642	Suppressor of mec-8 and unc-52 protein homolog 1 isoform X1. (515 aa)
	LOC104245596	Zinc finger matrin-type protein 2-like. (202 aa)
	LOC104247135	WW domain-binding protein 4. (262 aa)

Your Current Organism:

Nicotiana sylvestris

NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC104210355	LOC104211195	A0A1U7UTL4	A0A1U7V8D4	Zinc finger matrin-type protein 2-like isoform X1.	Microfibrillar-associated protein 1-like.	0.979
LOC104210355	LOC104213602	A0A1U7UTL4	A0A1U7V8Y3	Zinc finger matrin-type protein 2-like isoform X1.	pre-mRNA-splicing factor 38-like.	0.918
LOC104210355	LOC104220904	A0A1U7UTL4	A0A1U7VQJ0	Zinc finger matrin-type protein 2-like isoform X1.	Suppressor of mec-8 and unc-52 protein homolog 1-like.	0.841
LOC104210355	LOC104226108	A0A1U7UTL4	A0A1U7WNQ2	Zinc finger matrin-type protein 2-like isoform X1.	Putative nuclear matrix constituent protein 1-like protein.	0.853
LOC104210355	LOC104227356	A0A1U7UTL4	A0A1U7WT75	Zinc finger matrin-type protein 2-like isoform X1.	pre-mRNA-splicing factor 38.	0.918
LOC104210355	LOC104230192	A0A1U7UTL4	A0A1U7WV97	Zinc finger matrin-type protein 2-like isoform X1.	Ubiquitin-like protein 5.	0.877
LOC104210355	LOC104233325	A0A1U7UTL4	A0A1U7XDI3	Zinc finger matrin-type protein 2-like isoform X1.	Suppressor of mec-8 and unc-52 protein homolog 2 isoform X1.	0.827
LOC104210355	LOC104240642	A0A1U7UTL4	A0A1U7XSA1	Zinc finger matrin-type protein 2-like isoform X1.	Suppressor of mec-8 and unc-52 protein homolog 1 isoform X1.	0.867
LOC104210355	LOC104245596	A0A1U7UTL4	A0A1U7Y5X2	Zinc finger matrin-type protein 2-like isoform X1.	Zinc finger matrin-type protein 2-like.	0.900
LOC104210355	LOC104247135	A0A1U7UTL4	A0A1U7YB91	Zinc finger matrin-type protein 2-like isoform X1.	WW domain-binding protein 4.	0.888
LOC104211195	LOC104210355	A0A1U7V8D4	A0A1U7UTL4	Microfibrillar-associated protein 1-like.	Zinc finger matrin-type protein 2-like isoform X1.	0.979
LOC104211195	LOC104212655	A0A1U7V8D4	A0A1U7V1M6	Microfibrillar-associated protein 1-like.	Uncharacterized protein LOC104212655.	0.979
LOC104211195	LOC104213602	A0A1U7V8D4	A0A1U7V8Y3	Microfibrillar-associated protein 1-like.	pre-mRNA-splicing factor 38-like.	0.982
LOC104211195	LOC104220904	A0A1U7V8D4	A0A1U7VQJ0	Microfibrillar-associated protein 1-like.	Suppressor of mec-8 and unc-52 protein homolog 1-like.	0.972
LOC104211195	LOC104226108	A0A1U7V8D4	A0A1U7WNQ2	Microfibrillar-associated protein 1-like.	Putative nuclear matrix constituent protein 1-like protein.	0.973
LOC104211195	LOC104227356	A0A1U7V8D4	A0A1U7WT75	Microfibrillar-associated protein 1-like.	pre-mRNA-splicing factor 38.	0.985
LOC104211195	LOC104230192	A0A1U7V8D4	A0A1U7WV97	Microfibrillar-associated protein 1-like.	Ubiquitin-like protein 5.	0.984
LOC104211195	LOC104233325	A0A1U7V8D4	A0A1U7XDI3	Microfibrillar-associated protein 1-like.	Suppressor of mec-8 and unc-52 protein homolog 2 isoform X1.	0.965
LOC104211195	LOC104240642	A0A1U7V8D4	A0A1U7XSA1	Microfibrillar-associated protein 1-like.	Suppressor of mec-8 and unc-52 protein homolog 1 isoform X1.	0.972
LOC104211195	LOC104245596	A0A1U7V8D4	A0A1U7Y5X2	Microfibrillar-associated protein 1-like.	Zinc finger matrin-type protein 2-like.	0.979