STRINGSTRING
LOC104213344 LOC104213344 LOC104222729 LOC104222729 LOC104221271 LOC104221271 LOC104224912 LOC104224912 LOC104224351 LOC104224351 LOC104227436 LOC104227436 LOC104227912 LOC104227912 LOC104236941 LOC104236941 LOC104240542 LOC104240542 LOC104244661 LOC104244661
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC104213344FHA domain-containing protein At4g14490-like. (541 aa)
LOC104222729Calcium-binding protein P-like. (311 aa)
LOC104221271Serine/threonine-protein kinase prpf4B isoform X1. (1044 aa)
LOC104224912RNA-binding protein 39. (582 aa)
LOC104224351pre-mRNA-processing protein 40C-like isoform X1. (741 aa)
LOC104227436RNA-binding protein 25 isoform X1. (934 aa)
LOC104227912G patch domain-containing protein 11-like. (51 aa)
LOC104236941Serine/arginine repetitive matrix protein 1. (873 aa)
LOC104240542pre-mRNA-processing protein 40C-like. (318 aa)
LOC104244661Adhesive plaque matrix protein-like. (289 aa)
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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