69 items (Nicotiana sylvestris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104214508	Uncharacterized protein LOC104214508 isoform X1. (739 aa)
	LOC104214220	Cell division cycle protein 48 homolog. (810 aa)
	LOC104210648	Protein TPLATE. (1161 aa)
	LOC104214162	Dynamin-related protein 5A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (609 aa)
	LOC104210687	Non-specific serine/threonine protein kinase. (515 aa)
	LOC104213077	65-kDa microtubule-associated protein 1-like. (580 aa)
	LOC104235990	Mitotic checkpoint protein BUB3.3. (325 aa)
	LOC104236171	Protein gar2. (392 aa)
	LOC104234460	65-kDa microtubule-associated protein 8. (595 aa)
	LOC104236580	Cell division control protein 48 homolog C-like. (810 aa)
	LOC104233884	Protein IQ-DOMAIN 1. (448 aa)
	LOC104236453	Kinesin-like protein KIN12B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1332 aa)
	LOC104234406	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (958 aa)
	LOC104234863	Cell division cycle protein 48 homolog. (743 aa)
	LOC104238513	Serine/threonine-protein kinase ULK4. (1366 aa)
	LOC104235535	GPN-loop GTPase 1 homolog; Belongs to the GPN-loop GTPase family. (389 aa)
	LOC104235708	Exocyst complex component SEC8. (1071 aa)
	LOC104237945	Tubulin-folding cofactor B. (242 aa)
	LOC104235756	65-kDa microtubule-associated protein 1-like. (582 aa)
	LOC104237126	Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family. (700 aa)
	LOC104238148	Uncharacterized protein LOC104238148 isoform X1. (971 aa)
	LOC104239085	Microtubule-binding protein TANGLED. (412 aa)
	LOC104243609	Uncharacterized protein LOC104243609. (433 aa)
	LOC104244053	Protein NEDD1 isoform X1. (782 aa)
	LOC104248493	Mitotic-spindle organizing protein 1A-like. (73 aa)
	LOC104247677	Kinesin-like protein KIF22-A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (813 aa)
	LOC104246349	Formin-like protein; Belongs to the formin-like family. (1312 aa)
	LOC104249415	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (959 aa)
	LOC104246118	Cell division control protein 48 homolog B isoform X1; Belongs to the AAA ATPase family. (610 aa)
	LOC104246534	Mitogen-activated protein kinase kinase 6 isoform X1; Belongs to the protein kinase superfamily. (459 aa)
	LOC104246362	Non-specific serine/threonine protein kinase. (539 aa)
	LOC104246346	Uncharacterized protein At5g01610-like. (169 aa)
	LOC104247308	LOW QUALITY PROTEIN: cell division control protein 48 homolog C-like; Belongs to the AAA ATPase family. (658 aa)
	LOC104247119	Uncharacterized protein LOC104247119. (789 aa)
	LOC104245876	CLIP-associated protein-like. (1427 aa)
	LOC104245422	Protein IQ-DOMAIN 1 isoform X1. (441 aa)
	LOC104242738	Microtubule-associated protein RP/EB family member 1C. (334 aa)
	LOC104242850	RAN GTPase-activating protein 1-like. (534 aa)
	LOC104241893	HAUS augmin-like complex subunit 3 isoform X1. (616 aa)
	LOC104221229	Microtubule-associated protein RP/EB family member 1B-like. (267 aa)
	LOC104221844	Non-specific serine/threonine protein kinase. (547 aa)
	LOC104221336	Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2. (270 aa)
	LOC104220586	Exocyst complex component EXO84B. (774 aa)
	LOC104223016	Uncharacterized protein LOC104223016. (732 aa)
	LOC104223806	Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2. (323 aa)
	LOC104224051	Cell division control protein 48 homolog D-like. (87 aa)
	LOC104227032	Mitotic checkpoint protein BUB3.1. (340 aa)
	LOC104227269	Dynamin-related protein 5A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (609 aa)
	LOC104226923	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (299 aa)
	LOC104228626	65-kDa microtubule-associated protein 5 isoform X1. (570 aa)
	LOC104227465	187-kDa microtubule-associated protein AIR9 isoform X1. (1739 aa)
	LOC104232526	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (800 aa)
	LOC104232377	Protein IQ-DOMAIN 1. (419 aa)
	LOC104230940	Mitotic-spindle organizing protein 1B-like isoform X1. (88 aa)
	LOC104233696	Dynamin-related protein 5A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (821 aa)
	LOC104229993	Kinesin-like protein KIF22-A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (834 aa)
	LOC104230017	Exocyst complex component SEC6 isoform X1. (749 aa)
	LOC104230767	Putative serine/threonine-protein kinase haspin homolog. (624 aa)
	LOC104230828	Cell division cycle protein 48 homolog. (811 aa)
	LOC104235586	Mitotic-spindle organizing protein 1B-like. (71 aa)
	LOC104216027	Serine/threonine-protein kinase TIO. (1325 aa)
	LOC104219728	Uncharacterized protein LOC104219728. (498 aa)
	LOC104217755	Mitogen-activated protein kinase kinase kinase NPK1. (690 aa)
	LOC104213494	Cell division cycle protein 48 homolog. (806 aa)
	LOC104212750	Kinesin-like protein KIN12B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1337 aa)
	LOC104214942	Dynamin-related protein 1C; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (613 aa)
	LOC104212091	Uncharacterized protein LOC104212091. (332 aa)
	LOC104215326	CLIP-associated protein-like. (1422 aa)
	LOC104211244	RAN GTPase-activating protein 2. (546 aa)

Your Current Organism:

Nicotiana sylvestris

NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC104210648	LOC104214162	A0A1U7V6N6	A0A1U7V1G4	Protein TPLATE.	Dynamin-related protein 5A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.416
LOC104210648	LOC104214942	A0A1U7V6N6	A0A1U7VDF6	Protein TPLATE.	Dynamin-related protein 1C; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.497
LOC104210648	LOC104227269	A0A1U7V6N6	A0A1U7WGL2	Protein TPLATE.	Dynamin-related protein 5A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.416
LOC104210648	LOC104233884	A0A1U7V6N6	A0A1U7XFC6	Protein TPLATE.	Protein IQ-DOMAIN 1.	0.414
LOC104210648	LOC104247119	A0A1U7V6N6	A0A1U7YE16	Protein TPLATE.	Uncharacterized protein LOC104247119.	0.542
LOC104211244	LOC104227032	A0A1U7V9Q9	A0A1U7WFN0	RAN GTPase-activating protein 2.	Mitotic checkpoint protein BUB3.1.	0.573
LOC104211244	LOC104235990	A0A1U7V9Q9	A0A1U7X7Q8	RAN GTPase-activating protein 2.	Mitotic checkpoint protein BUB3.3.	0.573
LOC104211244	LOC104242850	A0A1U7V9Q9	A0A1U7YAI1	RAN GTPase-activating protein 2.	RAN GTPase-activating protein 1-like.	0.901
LOC104212091	LOC104214508	A0A1U7VCP1	A0A1U7V7Y1	Uncharacterized protein LOC104212091.	Uncharacterized protein LOC104214508 isoform X1.	0.499
LOC104212091	LOC104223016	A0A1U7VCP1	A0A1U7W638	Uncharacterized protein LOC104212091.	Uncharacterized protein LOC104223016.	0.499
LOC104212091	LOC104241893	A0A1U7VCP1	A0A1U7Y8J4	Uncharacterized protein LOC104212091.	HAUS augmin-like complex subunit 3 isoform X1.	0.601
LOC104212091	LOC104243609	A0A1U7VCP1	A0A1U7Y591	Uncharacterized protein LOC104212091.	Uncharacterized protein LOC104243609.	0.688
LOC104212091	LOC104247119	A0A1U7VCP1	A0A1U7YE16	Uncharacterized protein LOC104212091.	Uncharacterized protein LOC104247119.	0.683
LOC104213077	LOC104229993	A0A1U7V332	A0A1U7X3H5	65-kDa microtubule-associated protein 1-like.	Kinesin-like protein KIF22-A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.453
LOC104213077	LOC104234406	A0A1U7V332	A0A1U7XH49	65-kDa microtubule-associated protein 1-like.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.421
LOC104213077	LOC104247677	A0A1U7V332	A0A1U7YS58	65-kDa microtubule-associated protein 1-like.	Kinesin-like protein KIF22-A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.453
LOC104213077	LOC104249415	A0A1U7V332	A0A1U7YLZ3	65-kDa microtubule-associated protein 1-like.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.478
LOC104214162	LOC104210648	A0A1U7V1G4	A0A1U7V6N6	Dynamin-related protein 5A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Protein TPLATE.	0.416
LOC104214508	LOC104212091	A0A1U7V7Y1	A0A1U7VCP1	Uncharacterized protein LOC104214508 isoform X1.	Uncharacterized protein LOC104212091.	0.499
LOC104214508	LOC104241893	A0A1U7V7Y1	A0A1U7Y8J4	Uncharacterized protein LOC104214508 isoform X1.	HAUS augmin-like complex subunit 3 isoform X1.	0.962