STRINGSTRING
LOC104235085 LOC104235085 LOC104239257 LOC104239257 LOC104239684 LOC104239684 LOC104236214 LOC104236214 LOC104241339 LOC104241339 LOC104240325 LOC104240325 LOC104243855 LOC104243855 LOC104248249 LOC104248249 LOC104248435 LOC104248435 LOC104248682 LOC104248682 LOC104247157 LOC104247157 LOC104247866 LOC104247866 LOC104248908 LOC104248908 LOC104248248 LOC104248248 LOC104245960 LOC104245960 LOC104249736 LOC104249736 LOC104249015 LOC104249015 LOC104246649 LOC104246649 LOC104249722 LOC104249722 LOC104247463 LOC104247463 LOC104248751 LOC104248751 LOC104248933 LOC104248933 LOC104249371 LOC104249371 LOC104241848 LOC104241848 LOC104238430 LOC104238430 LOC104242538 LOC104242538 LOC104241501 LOC104241501 LOC104245598 LOC104245598 LOC104244761 LOC104244761 LOC104247378 LOC104247378 LOC104247308 LOC104247308 LOC104246869 LOC104246869 LOC104211172 LOC104211172 LOC104211170 LOC104211170 LOC104214144 LOC104214144 LOC104212799 LOC104212799 LOC104214969 LOC104214969 LOC104214023 LOC104214023 LOC104215776 LOC104215776 LOC104210877 LOC104210877 LOC104211393 LOC104211393 LOC104211855 LOC104211855 LOC104216694 LOC104216694 LOC104242682 LOC104242682 LOC104213902 LOC104213902 LOC104218840 LOC104218840 LOC104214092 LOC104214092 LOC104215328 LOC104215328 LOC104216136 LOC104216136 LOC104248103 LOC104248103 LOC104220038 LOC104220038 LOC104220403 LOC104220403 LOC104220524 LOC104220524 LOC104217403 LOC104217403 LOC104221556 LOC104221556 LOC104218888 LOC104218888 LOC104219594 LOC104219594 LOC104222963 LOC104222963 LOC104225085 LOC104225085 LOC104223130 LOC104223130 LOC104225819 LOC104225819 LOC104225303 LOC104225303 LOC104225060 LOC104225060 LOC104226424 LOC104226424 LOC104228021 LOC104228021 LOC104223331 LOC104223331 LOC104226567 LOC104226567 LOC104228026 LOC104228026 LOC104229171 LOC104229171 LOC104228252 LOC104228252 LOC104227583 LOC104227583 LOC104227796 LOC104227796 LOC104225362 LOC104225362 LOC104225374 LOC104225374 LOC104225937 LOC104225937 LOC104226335 LOC104226335 LOC104231182 LOC104231182 LOC104229219 LOC104229219 LOC104230719 LOC104230719 LOC104227157 LOC104227157 LOC104227984 LOC104227984 LOC104228568 LOC104228568 LOC104229891 LOC104229891 LOC104234409 LOC104234409 LOC104235660 LOC104235660 LOC104234937 LOC104234937 LOC104236580 LOC104236580 LOC104237785 LOC104237785 LOC104233754 LOC104233754 LOC104234057 LOC104234057 LOC104237826 LOC104237826 LOC104238874 LOC104238874 LOC104238429 LOC104238429
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC104235085Ribosome-recycling factor, chloroplastic. (282 aa)
LOC104239257Protein Iojap, chloroplastic. (229 aa)
LOC104239684Uncharacterized protein LOC104239684. (190 aa)
LOC104236214Uncharacterized protein LOC104236214 isoform X1. (659 aa)
LOC104241339Elongation factor 2-like. (189 aa)
LOC104240325Nicalin-1-like isoform X1. (565 aa)
LOC104243855Uncharacterized protein LOC104243855. (546 aa)
LOC104248249Uncharacterized protein LOC104248249. (130 aa)
LOC104248435N-alpha-acetyltransferase 16, NatA auxiliary subunit. (899 aa)
LOC104248682GTP-binding protein ERG; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (430 aa)
LOC104247157Elongation factor 2. (850 aa)
LOC104247866Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family. (475 aa)
LOC104248908Uncharacterized protein LOC104248908. (642 aa)
LOC104248248Uncharacterized protein LOC104248248. (132 aa)
LOC104245960Ribosome-binding factor PSRP1, chloroplastic. (304 aa)
LOC104249736Uncharacterized protein LOC104249736. (233 aa)
LOC104249015Uncharacterized protein LOC104249015 isoform X1. (424 aa)
LOC104246649Translation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. (681 aa)
LOC104249722Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP. (418 aa)
LOC104247463pre-rRNA-processing protein TSR2 homolog. (203 aa)
LOC104248751Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (751 aa)
LOC104248933Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP. (394 aa)
LOC104249371Uncharacterized protein LOC104249371. (95 aa)
LOC104241848Eukaryotic translation initiation factor 5A. (160 aa)
LOC104238430Uncharacterized protein LOC104238430. (703 aa)
LOC104242538Eukaryotic translation initiation factor 5A. (159 aa)
LOC104241501Elongation factor 2-like. (314 aa)
LOC104245598Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (1040 aa)
LOC104244761Signal recognition particle receptor subunit alpha. (627 aa)
LOC104247378Uncharacterized protein LOC104247378 isoform X1. (893 aa)
LOC104247308LOW QUALITY PROTEIN: cell division control protein 48 homolog C-like; Belongs to the AAA ATPase family. (658 aa)
LOC104246869Transmembrane protein 147. (228 aa)
LOC104211172Eukaryotic translation initiation factor 2A-like. (321 aa)
LOC104211170Eukaryotic translation initiation factor 2A-like isoform X1. (203 aa)
LOC104214144LETM1 and EF-hand domain-containing protein 1, mitochondrial. (759 aa)
LOC104212799Cell division protein FtsY homolog, chloroplastic. (371 aa)
LOC104214969Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (520 aa)
LOC104214023Ribosome-recycling factor, chloroplastic. (265 aa)
LOC104215776pre-rRNA-processing protein TSR2 homolog. (203 aa)
LOC104210877Nicalin-1-like. (562 aa)
LOC104211393Eukaryotic translation initiation factor 5A-2-like. (75 aa)
LOC104211855Zinc finger protein 598. (920 aa)
LOC104216694Eukaryotic translation initiation factor 2 subunit alpha-like. (343 aa)
LOC10424268260S acidic ribosomal protein P1-like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
LOC10421390260S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
LOC104218840Translation initiation factor IF-1, chloroplastic. (156 aa)
LOC10421409260S acidic ribosomal protein P1-like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
LOC104215328Putative GTP-binding protein 6. (546 aa)
LOC104216136Nuclear export mediator factor NEMF homolog. (147 aa)
LOC104248103Protein Iojap-related, mitochondrial. (192 aa)
LOC104220038Eukaryotic translation initiation factor 2 subunit alpha-like. (344 aa)
LOC104220403Programmed cell death protein 4. (723 aa)
LOC104220524Protein transport protein Sec61 subunit alpha-like; Belongs to the SecY/SEC61-alpha family. (475 aa)
LOC104217403GTP-binding protein At3g49725, chloroplastic. (590 aa)
LOC104221556ABC transporter E family member 2. (606 aa)
LOC104218888Eukaryotic translation initiation factor 2A-like. (300 aa)
LOC104219594Pentatricopeptide repeat-containing protein At3g46610-like. (746 aa)
LOC104222963Signal recognition particle receptor subunit alpha-like isoform X1. (383 aa)
LOC10422508560S acidic ribosomal protein P1-like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
LOC104223130dnaJ homolog subfamily C member 2. (322 aa)
LOC104225819Eukaryotic translation initiation factor 5A. (159 aa)
LOC104225303Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (656 aa)
LOC104225060Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
LOC104226424Probable ribosome-binding factor A, chloroplastic. (228 aa)
LOC104228021Elongation factor Tu GTP-binding domain-containing protein 1. (1022 aa)
LOC10422333160S acidic ribosomal protein P1-like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
LOC104226567LETM1 and EF-hand domain-containing protein 1, mitochondrial. (748 aa)
LOC104228026Protein disulfide-isomerase LQY1. (168 aa)
LOC104229171dnaJ homolog subfamily C member 2-like. (649 aa)
LOC104228252N-alpha-acetyltransferase 15, NatA auxiliary subunit-like isoform X1. (902 aa)
LOC104227583Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (603 aa)
LOC104227796Guanine nucleotide-binding protein subunit beta-like protein. (326 aa)
LOC104225362GTP-binding protein ERG; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (439 aa)
LOC104225374Translational activator GCN1 isoform X1. (2648 aa)
LOC104225937Guanine nucleotide-binding protein subunit beta-like protein. (328 aa)
LOC104226335Nicalin-1-like. (359 aa)
LOC104231182Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (599 aa)
LOC104229219Guanine nucleotide-binding protein subunit beta-like protein. (325 aa)
LOC104230719Translocase of chloroplast 159, chloroplastic isoform X1. (1480 aa)
LOC104227157Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. (267 aa)
LOC104227984Trigger factor-like protein TIG, Chloroplastic. (540 aa)
LOC10422856860S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (511 aa)
LOC104229891Eukaryotic translation initiation factor 5A. (160 aa)
LOC104234409Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (231 aa)
LOC104235660Uncharacterized protein LOC104235660 isoform X1. (718 aa)
LOC104234937Eukaryotic translation initiation factor 5A. (159 aa)
LOC104236580Cell division control protein 48 homolog C-like. (810 aa)
LOC104237785Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (440 aa)
LOC104233754E3 ubiquitin-protein ligase listerin. (1888 aa)
LOC104234057Uncharacterized protein LOC104234057. (553 aa)
LOC104237826Signal recognition particle receptor subunit alpha homolog. (240 aa)
LOC104238874Nuclear export mediator factor NEMF. (999 aa)
LOC104238429Programmed cell death protein 4-like. (714 aa)
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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