39 items (Nicotiana sylvestris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104227010	S-acyltransferase; Belongs to the DHHC palmitoyltransferase family. (482 aa)
	LOC104228897	Gibberellin 3-beta-dioxygenase 4; Belongs to the iron/ascorbate-dependent oxidoreductase family. (319 aa)
	LOC104233806	Arabinogalactan peptide 14-like. (60 aa)
	LOC104232378	Tropinone reductase-like 3. (253 aa)
	LOC104238107	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (315 aa)
	LOC104233863	Gibberellin 2-beta-dioxygenase 8-like; Belongs to the iron/ascorbate-dependent oxidoreductase family. (319 aa)
	LOC104239577	Myosin-6-like isoform X3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1508 aa)
	LOC104236108	Golgi to ER traffic protein 4 homolog isoform X1. (325 aa)
	LOC104237274	Zinc finger protein 5-like. (257 aa)
	LOC104241348	Zinc finger protein 5-like. (214 aa)
	LOC104242311	Myosin-6-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1512 aa)
	LOC104247961	Phosphatidylinositol 4-kinase beta 1; Belongs to the PI3/PI4-kinase family. (615 aa)
	LOC104245946	enoyl-CoA hydratase domain-containing protein 3, mitochondrial-like. (239 aa)
	LOC104249349	Probable protein kinase At2g41970. (352 aa)
	LOC104247205	Uncharacterized protein LOC104247205. (177 aa)
	LOC104248352	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (544 aa)
	LOC104211204	Pistil-specific extensin-like protein. (175 aa)
	LOC104215150	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (315 aa)
	LOC104210730	Golgi to ER traffic protein 4 homolog. (328 aa)
	LOC104214203	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (802 aa)
	LOC104214618	Phosphatidylinositol 4-kinase beta 1-like. (545 aa)
	LOC104214631	Scarecrow-like protein 22; Belongs to the GRAS family. (755 aa)
	LOC104214638	Uncharacterized protein LOC104214638. (555 aa)
	LOC104213400	acyl-CoA dehydrogenase family member 10. (820 aa)
	LOC104218681	Uncharacterized protein LOC104218681 isoform X1. (182 aa)
	LOC104218766	Probable protein kinase At2g41970 isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (365 aa)
	LOC104216351	ATPase LOC104216351; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inse [...] (361 aa)
	LOC104221663	Probable protein kinase At2g41970; Belongs to the protein kinase superfamily. Tyr protein kinase family. (366 aa)
	LOC104217790	Down syndrome critical region protein 3 isoform X1. (368 aa)
	LOC104217996	pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1285 aa)
	LOC104218907	Arabinogalactan peptide 14. (60 aa)
	LOC104220534	Tropinone reductase-like 3 isoform X1. (253 aa)
	LOC104223130	dnaJ homolog subfamily C member 2. (322 aa)
	LOC104225566	Zinc finger protein 5-like isoform X1. (221 aa)
	LOC104227188	Myosin-7-like isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1731 aa)
	LOC104226152	Probable protein kinase At2g41970; Belongs to the protein kinase superfamily. Tyr protein kinase family. (369 aa)
	LOC104226296	Proline-rich protein 1. (176 aa)
	LOC104222995	ATPase LOC104222995; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inse [...] (362 aa)
	LOC104223886	ATPase LOC104223886; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inse [...] (360 aa)

Your Current Organism:

Nicotiana sylvestris

NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC104210730	LOC104216351	A0A1U7V6X7	A0A1U7VRZ5	Golgi to ER traffic protein 4 homolog.	ATPase LOC104216351; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inse [...]	0.795
LOC104210730	LOC104222995	A0A1U7V6X7	A0A1U7WDC7	Golgi to ER traffic protein 4 homolog.	ATPase LOC104222995; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inse [...]	0.795
LOC104210730	LOC104223886	A0A1U7V6X7	A0A1U7WGF1	Golgi to ER traffic protein 4 homolog.	ATPase LOC104223886; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inse [...]	0.795
LOC104213400	LOC104220534	A0A1U7VH76	A0A1U7W514	acyl-CoA dehydrogenase family member 10.	Tropinone reductase-like 3 isoform X1.	0.554
LOC104213400	LOC104232378	A0A1U7VH76	A0A1U7XBP2	acyl-CoA dehydrogenase family member 10.	Tropinone reductase-like 3.	0.554
LOC104213400	LOC104245946	A0A1U7VH76	A0A1U7YMA4	acyl-CoA dehydrogenase family member 10.	enoyl-CoA hydratase domain-containing protein 3, mitochondrial-like.	0.602
LOC104214618	LOC104247961	A0A1U7V8A6	A0A1U7YE83	Phosphatidylinositol 4-kinase beta 1-like.	Phosphatidylinositol 4-kinase beta 1; Belongs to the PI3/PI4-kinase family.	0.991
LOC104214631	LOC104223130	A0A1U7V8B4	A0A1U7W6H4	Scarecrow-like protein 22; Belongs to the GRAS family.	dnaJ homolog subfamily C member 2.	0.499
LOC104216351	LOC104210730	A0A1U7VRZ5	A0A1U7V6X7	ATPase LOC104216351; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inse [...]	Golgi to ER traffic protein 4 homolog.	0.795
LOC104216351	LOC104236108	A0A1U7VRZ5	A0A1U7XMW2	ATPase LOC104216351; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inse [...]	Golgi to ER traffic protein 4 homolog isoform X1.	0.795
LOC104220534	LOC104213400	A0A1U7W514	A0A1U7VH76	Tropinone reductase-like 3 isoform X1.	acyl-CoA dehydrogenase family member 10.	0.554
LOC104220534	LOC104232378	A0A1U7W514	A0A1U7XBP2	Tropinone reductase-like 3 isoform X1.	Tropinone reductase-like 3.	0.900
LOC104220534	LOC104245946	A0A1U7W514	A0A1U7YMA4	Tropinone reductase-like 3 isoform X1.	enoyl-CoA hydratase domain-containing protein 3, mitochondrial-like.	0.529
LOC104222995	LOC104210730	A0A1U7WDC7	A0A1U7V6X7	ATPase LOC104222995; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inse [...]	Golgi to ER traffic protein 4 homolog.	0.795
LOC104222995	LOC104236108	A0A1U7WDC7	A0A1U7XMW2	ATPase LOC104222995; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inse [...]	Golgi to ER traffic protein 4 homolog isoform X1.	0.795
LOC104223130	LOC104214631	A0A1U7W6H4	A0A1U7V8B4	dnaJ homolog subfamily C member 2.	Scarecrow-like protein 22; Belongs to the GRAS family.	0.499
LOC104223886	LOC104210730	A0A1U7WGF1	A0A1U7V6X7	ATPase LOC104223886; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inse [...]	Golgi to ER traffic protein 4 homolog.	0.795
LOC104223886	LOC104236108	A0A1U7WGF1	A0A1U7XMW2	ATPase LOC104223886; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for inse [...]	Golgi to ER traffic protein 4 homolog isoform X1.	0.795
LOC104232378	LOC104213400	A0A1U7XBP2	A0A1U7VH76	Tropinone reductase-like 3.	acyl-CoA dehydrogenase family member 10.	0.554
LOC104232378	LOC104220534	A0A1U7XBP2	A0A1U7W514	Tropinone reductase-like 3.	Tropinone reductase-like 3 isoform X1.	0.900