STRINGSTRING
LOC104238012 LOC104238012 LOC104234946 LOC104234946 LOC104240632 LOC104240632 LOC104240659 LOC104240659 LOC104236214 LOC104236214 LOC104240995 LOC104240995 LOC104242211 LOC104242211 LOC104240654 LOC104240654 LOC104240657 LOC104240657 LOC104245916 LOC104245916 LOC104241501 LOC104241501 LOC104246230 LOC104246230 LOC104242661 LOC104242661 LOC104247044 LOC104247044 LOC104244486 LOC104244486 LOC104247157 LOC104247157 LOC104246649 LOC104246649 LOC104211808 LOC104211808 LOC104247873 LOC104247873 TUFA TUFA TUFB TUFB LOC104217900 LOC104217900 LOC104217258 LOC104217258 LOC104218790 LOC104218790 LOC104214671 LOC104214671 LOC104214738 LOC104214738 LOC104214057 LOC104214057 LOC104215677 LOC104215677 LOC104218070 LOC104218070 LOC104223071 LOC104223071 LOC104219178 LOC104219178 LOC104220173 LOC104220173 LOC104222413 LOC104222413 LOC104224984 LOC104224984 LOC104225303 LOC104225303 LOC104224303 LOC104224303 LOC104228021 LOC104228021 LOC104225763 LOC104225763 LOC104229047 LOC104229047 LOC104231064 LOC104231064 LOC104228341 LOC104228341 LOC104231890 LOC104231890 LOC104229352 LOC104229352 LOC104235573 LOC104235573 LOC104231338 LOC104231338 LOC104234935 LOC104234935 LOC104235238 LOC104235238 LOC104236592 LOC104236592 LOC104238149 LOC104238149 LOC104237833 LOC104237833
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC104238012Eukaryotic translation initiation factor 2 subunit 3-like. (264 aa)
LOC10423494660S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (389 aa)
LOC104240632Eukaryotic translation initiation factor 2 subunit gamma-like. (464 aa)
LOC104240659Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (784 aa)
LOC104236214Uncharacterized protein LOC104236214 isoform X1. (659 aa)
LOC10424099550S ribosomal protein L3, chloroplastic; Belongs to the universal ribosomal protein uL3 family. (274 aa)
LOC104242211116 kDa U5 small nuclear ribonucleoprotein component-like. (987 aa)
LOC104240654Eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1. (520 aa)
LOC104240657Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC104245916Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (762 aa)
LOC104241501Elongation factor 2-like. (314 aa)
LOC104246230H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (188 aa)
LOC104242661H/ACA ribonucleoprotein complex non-core subunit NAF1-like. (694 aa)
LOC104247044LOW QUALITY PROTEIN: eukaryotic translation initiation factor 5B-like. (1233 aa)
LOC10424448650S ribosomal protein L3-2, chloroplastic-like; Belongs to the universal ribosomal protein uL3 family. (294 aa)
LOC104247157Elongation factor 2. (850 aa)
LOC104246649Translation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. (681 aa)
LOC10421180860S ribosomal protein L3-like; Belongs to the universal ribosomal protein uL3 family. (389 aa)
LOC104247873Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (1014 aa)
TUFAElongation factor TuA, chloroplastic; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (478 aa)
TUFBElongation factor TuB, chloroplastic; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (485 aa)
LOC10421790060S ribosomal protein L35a-3-like. (112 aa)
LOC104217258H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (189 aa)
LOC104218790Translation factor GUF1 homolog, chloroplastic. (679 aa)
LOC10421467160S ribosomal protein L35a-3-like. (112 aa)
LOC104214738Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC104214057Translation initiation factor IF-2, mitochondrial. (733 aa)
LOC10421567760S ribosomal protein L35a-3-like. (112 aa)
LOC104218070Eukaryotic translation initiation factor 2 subunit gamma-like isoform X1. (501 aa)
LOC104223071Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (485 aa)
LOC104219178Probable alanine--tRNA ligase, chloroplastic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (991 aa)
LOC104220173Eukaryotic translation initiation factor 2 subunit gamma-like. (464 aa)
LOC104222413HBS1-like protein. (547 aa)
LOC104224984Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (450 aa)
LOC104225303Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (656 aa)
LOC10422430350S ribosomal protein L3-2, chloroplastic-like; Belongs to the universal ribosomal protein uL3 family. (294 aa)
LOC104228021Elongation factor Tu GTP-binding domain-containing protein 1. (1022 aa)
LOC104225763Eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like. (343 aa)
LOC104229047Uncharacterized protein LOC104229047. (852 aa)
LOC10423106460S ribosomal protein L3-2; Belongs to the universal ribosomal protein uL3 family. (389 aa)
LOC104228341Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (478 aa)
LOC104231890Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC104229352Eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1. (535 aa)
LOC10423557360S ribosomal protein L35a-3. (112 aa)
LOC104231338Eukaryotic translation initiation factor 2 subunit gamma-like. (464 aa)
LOC104234935HBS1-like protein. (470 aa)
LOC104235238Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (446 aa)
LOC104236592Eukaryotic translation initiation factor 5B-like. (1389 aa)
LOC104238149Translation initiation factor IF-2, chloroplastic. (1013 aa)
LOC104237833Translation factor GUF1 homolog, organellar chromatophore. (665 aa)
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.