STRINGSTRING
LOC104228021 LOC104228021 LOC104224984 LOC104224984 LOC104222413 LOC104222413 LOC104220173 LOC104220173 LOC104223071 LOC104223071 LOC104218070 LOC104218070 LOC104212781 LOC104212781 LOC104214738 LOC104214738 LOC104231890 LOC104231890 TUFB TUFB TUFA TUFA LOC104246649 LOC104246649 LOC104247157 LOC104247157 LOC104247044 LOC104247044 LOC104245916 LOC104245916 LOC104240657 LOC104240657 LOC104242211 LOC104242211 LOC104240709 LOC104240709 LOC104239712 LOC104239712 LOC104240659 LOC104240659 LOC104240632 LOC104240632 LOC104239307 LOC104239307 LOC104238012 LOC104238012 LOC104234935 LOC104234935 LOC104231338 LOC104231338 LOC104228341 LOC104228341 LOC104225763 LOC104225763
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC104228021Elongation factor Tu GTP-binding domain-containing protein 1. (1022 aa)
LOC104224984Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (450 aa)
LOC104222413HBS1-like protein. (547 aa)
LOC104220173Eukaryotic translation initiation factor 2 subunit gamma-like. (464 aa)
LOC104223071Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (485 aa)
LOC104218070Eukaryotic translation initiation factor 2 subunit gamma-like isoform X1. (501 aa)
LOC104212781Elongation factor 1-alpha-like. (222 aa)
LOC104214738Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC104231890Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
TUFBElongation factor TuB, chloroplastic; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (485 aa)
TUFAElongation factor TuA, chloroplastic; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (478 aa)
LOC104246649Translation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. (681 aa)
LOC104247157Elongation factor 2. (850 aa)
LOC104247044LOW QUALITY PROTEIN: eukaryotic translation initiation factor 5B-like. (1233 aa)
LOC104245916Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (762 aa)
LOC104240657Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC104242211116 kDa U5 small nuclear ribonucleoprotein component-like. (987 aa)
LOC104240709Elongation factor 1-alpha-like. (279 aa)
LOC104239712Elongation factor 1-alpha-like. (222 aa)
LOC104240659Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (784 aa)
LOC104240632Eukaryotic translation initiation factor 2 subunit gamma-like. (464 aa)
LOC104239307Uncharacterized protein LOC104239307. (579 aa)
LOC104238012Eukaryotic translation initiation factor 2 subunit 3-like. (264 aa)
LOC104234935HBS1-like protein. (470 aa)
LOC104231338Eukaryotic translation initiation factor 2 subunit gamma-like. (464 aa)
LOC104228341Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (478 aa)
LOC104225763Eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like. (343 aa)
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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