19 items (Nicotiana sylvestris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104230518	Phenylalanine ammonia-lyase. (712 aa)
	LOC104228987	Annexin. (316 aa)
	LOC104221734	Annexin. (332 aa)
	LOC104224984	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (450 aa)
	LOC104223071	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (485 aa)
	LOC104218178	Phenylalanine ammonia-lyase. (717 aa)
	LOC104221754	Annexin. (318 aa)
	LOC104217440	Annexin. (319 aa)
	LOC104212402	Phenylalanine ammonia-lyase. (718 aa)
	LOC104214415	cinnamoyl-CoA reductase 1-like. (338 aa)
	LOC104211097	cinnamoyl-CoA reductase 1-like. (322 aa)
	LOC104248182	Annexin. (316 aa)
	LOC104241192	Phenylalanine ammonia-lyase. (717 aa)
	LOC104240434	Annexin. (316 aa)
	LOC104238394	Annexin. (316 aa)
	LOC104235316	Annexin. (314 aa)
	LOC104235238	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (446 aa)
	LOC104228341	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (478 aa)
	LOC104231200	Annexin. (317 aa)

Your Current Organism:

Nicotiana sylvestris

NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC104211097	LOC104212402	A0A1U7UQL1	A0A1U7VDN4	cinnamoyl-CoA reductase 1-like.	Phenylalanine ammonia-lyase.	0.683
LOC104211097	LOC104214415	A0A1U7UQL1	A0A1U7V2B2	cinnamoyl-CoA reductase 1-like.	cinnamoyl-CoA reductase 1-like.	0.900
LOC104211097	LOC104218178	A0A1U7UQL1	A0A1U7VY30	cinnamoyl-CoA reductase 1-like.	Phenylalanine ammonia-lyase.	0.767
LOC104211097	LOC104230518	A0A1U7UQL1	A0A1U7WST5	cinnamoyl-CoA reductase 1-like.	Phenylalanine ammonia-lyase.	0.815
LOC104211097	LOC104241192	A0A1U7UQL1	A0A1U7Y6H6	cinnamoyl-CoA reductase 1-like.	Phenylalanine ammonia-lyase.	0.653
LOC104212402	LOC104211097	A0A1U7VDN4	A0A1U7UQL1	Phenylalanine ammonia-lyase.	cinnamoyl-CoA reductase 1-like.	0.683
LOC104212402	LOC104214415	A0A1U7VDN4	A0A1U7V2B2	Phenylalanine ammonia-lyase.	cinnamoyl-CoA reductase 1-like.	0.683
LOC104214415	LOC104211097	A0A1U7V2B2	A0A1U7UQL1	cinnamoyl-CoA reductase 1-like.	cinnamoyl-CoA reductase 1-like.	0.900
LOC104214415	LOC104212402	A0A1U7V2B2	A0A1U7VDN4	cinnamoyl-CoA reductase 1-like.	Phenylalanine ammonia-lyase.	0.683
LOC104214415	LOC104218178	A0A1U7V2B2	A0A1U7VY30	cinnamoyl-CoA reductase 1-like.	Phenylalanine ammonia-lyase.	0.767
LOC104214415	LOC104230518	A0A1U7V2B2	A0A1U7WST5	cinnamoyl-CoA reductase 1-like.	Phenylalanine ammonia-lyase.	0.819
LOC104214415	LOC104241192	A0A1U7V2B2	A0A1U7Y6H6	cinnamoyl-CoA reductase 1-like.	Phenylalanine ammonia-lyase.	0.653
LOC104218178	LOC104211097	A0A1U7VY30	A0A1U7UQL1	Phenylalanine ammonia-lyase.	cinnamoyl-CoA reductase 1-like.	0.767
LOC104218178	LOC104214415	A0A1U7VY30	A0A1U7V2B2	Phenylalanine ammonia-lyase.	cinnamoyl-CoA reductase 1-like.	0.767
LOC104230518	LOC104211097	A0A1U7WST5	A0A1U7UQL1	Phenylalanine ammonia-lyase.	cinnamoyl-CoA reductase 1-like.	0.815
LOC104230518	LOC104214415	A0A1U7WST5	A0A1U7V2B2	Phenylalanine ammonia-lyase.	cinnamoyl-CoA reductase 1-like.	0.819
LOC104241192	LOC104211097	A0A1U7Y6H6	A0A1U7UQL1	Phenylalanine ammonia-lyase.	cinnamoyl-CoA reductase 1-like.	0.653
LOC104241192	LOC104214415	A0A1U7Y6H6	A0A1U7V2B2	Phenylalanine ammonia-lyase.	cinnamoyl-CoA reductase 1-like.	0.653