STRINGSTRING
LOC107759114 LOC107759114 LOC107759454 LOC107759454 LOC107759655 LOC107759655 LOC107759809 LOC107759809 LOC107759901 LOC107759901 LOC107760762 LOC107760762 LOC107761141 LOC107761141 LOC107761189 LOC107761189 LOC107761280 LOC107761280 LOC107761513 LOC107761513 LOC107762441 LOC107762441 LOC107762548 LOC107762548 LOC107762903 LOC107762903 LOC107763003 LOC107763003 LOC107763165 LOC107763165 LOC107763247 LOC107763247 LOC107763495 LOC107763495 LOC107763822 LOC107763822 LOC107764246 LOC107764246 LOC107764996 LOC107764996 LOC107765079 LOC107765079 LOC107765327 LOC107765327 LOC107765913 LOC107765913 LOC107766582 LOC107766582 LOC107766417 LOC107766417 LOC107766698 LOC107766698 LOC107767657 LOC107767657 LOC107772126 LOC107772126 LOC107772700 LOC107772700 LOC107774523 LOC107774523 LOC107776580 LOC107776580 LOC107777170 LOC107777170 LOC107777740 LOC107777740 LOC107778074 LOC107778074 LOC107778829 LOC107778829 LOC107779733 LOC107779733 LOC107784913 LOC107784913 LOC107785343 LOC107785343 LOC107785484 LOC107785484 LOC107785640 LOC107785640 LOC107785938 LOC107785938 LOC107786415 LOC107786415 LOC107787358 LOC107787358 LOC107790515 LOC107790515 LOC107791025 LOC107791025 LOC107791433 LOC107791433 LOC107791600 LOC107791600 LOC107791766 LOC107791766 LOC107794086 LOC107794086 LOC107794364 LOC107794364 LOC107796665 LOC107796665 LOC107797609 LOC107797609 LOC107797994 LOC107797994 LOC107800461 LOC107800461 LOC107801586 LOC107801586 LOC107804394 LOC107804394 LOC107805500 LOC107805500 LOC107805527 LOC107805527 LOC107806596 LOC107806596 LOC107809588 LOC107809588 LOC107810192 LOC107810192 LOC107810216 LOC107810216 LOC107810733 LOC107810733 LOC107811994 LOC107811994 LOC107812739 LOC107812739 LOC107813256 LOC107813256 LOC107813348 LOC107813348 LOC107814297 LOC107814297 LOC107814336 LOC107814336 LOC107814562 LOC107814562 LOC107815904 LOC107815904 LOC107816534 LOC107816534 LOC107816608 LOC107816608 LOC107816718 LOC107816718 LOC107817043 LOC107817043 LOC107817060 LOC107817060 LOC107816977 LOC107816977 LOC107818123 LOC107818123 LOC107818336 LOC107818336 LOC107818748 LOC107818748 LOC107819394 LOC107819394 LOC107819652 LOC107819652 LOC107820410 LOC107820410 LOC107820519 LOC107820519 LOC107821048 LOC107821048 LOC107821379 LOC107821379 LOC107821610 LOC107821610 LOC107822066 LOC107822066 LOC107824176 LOC107824176 LOC107824417 LOC107824417 LOC107824884 LOC107824884 LOC107825713 LOC107825713 LOC107827628 LOC107827628 LOC107828155 LOC107828155 LOC107828159 LOC107828159 LOC107829397 LOC107829397 LOC107830439 LOC107830439 LOC107831709 LOC107831709 LOC107831770 LOC107831770 LOC107832233 LOC107832233
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107759114DNA replication ATP-dependent helicase/nuclease DNA2-like. (851 aa)
LOC107759454BRCT domain-containing protein At4g02110-like. (1109 aa)
LOC107759655Serine/threonine-protein kinase ATM-like isoform X1. (521 aa)
LOC107759809Serine/threonine-protein kinase ATR-like. (924 aa)
LOC107759901ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (726 aa)
LOC107760762Uncharacterized protein LOC107760762. (1124 aa)
LOC107761141DNA replication ATP-dependent helicase/nuclease DNA2-like. (111 aa)
LOC107761189DNA repair protein RAD50-like isoform X1. (1180 aa)
LOC107761280ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (878 aa)
LOC107761513Uncharacterized protein LOC107761513. (201 aa)
LOC107762441Meiotic recombination protein DMC1 homolog; Belongs to the RecA family. (341 aa)
LOC107762548LOB domain-containing protein 15-like. (231 aa)
LOC107762903DNA repair protein RAD51 homolog 4-like isoform X1. (106 aa)
LOC107763003Serine/threonine-protein kinase ATM; Belongs to the PI3/PI4-kinase family. (3062 aa)
LOC107763165Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (733 aa)
LOC107763247Uncharacterized protein LOC107763247. (281 aa)
LOC107763495Serine/threonine-protein kinase ATR-like isoform X1. (1078 aa)
LOC107763822Uncharacterized protein LOC107763822. (495 aa)
LOC107764246DNA replication ATP-dependent helicase/nuclease dna2-like. (121 aa)
LOC107764996Uncharacterized protein LOC107764996. (605 aa)
LOC107765079Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (268 aa)
LOC107765327ATP-dependent DNA helicase Q-like 4A isoform X1. (1186 aa)
LOC107765913BRCT domain-containing protein At4g02110-like isoform X1. (1410 aa)
LOC107766582Uncharacterized protein LOC107766582. (489 aa)
LOC107766417DNA replication ATP-dependent helicase/nuclease DNA2-like isoform X1. (1133 aa)
LOC107766698BRCT domain-containing protein At4g02110-like isoform X1. (1108 aa)
LOC107767657Fanconi anemia group J protein homolog. (1279 aa)
LOC107772126DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (913 aa)
LOC107772700Uncharacterized protein LOC107772700. (510 aa)
LOC107774523Uncharacterized protein LOC107774523. (230 aa)
LOC107776580DNA excision repair protein ERCC-1-like. (399 aa)
LOC107777170Uncharacterized protein LOC107777170. (341 aa)
LOC107777740Structure-specific endonuclease subunit SLX1 homolog. (233 aa)
LOC107778074Regulator of telomere elongation helicase 1-like isoform X1. (1041 aa)
LOC107778829ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (726 aa)
LOC107779733Nijmegen breakage syndrome 1 protein-like. (555 aa)
LOC107784913Uncharacterized protein LOC107784913. (507 aa)
LOC107785343Exonuclease 1-like isoform X1. (774 aa)
LOC107785484DNA repair protein RAD51 homolog 3-like isoform X1. (347 aa)
LOC107785640Flap endonuclease GEN-like 2. (597 aa)
LOC107785938DNA repair protein RAD51 homolog 4-like. (175 aa)
LOC107786415LOB domain-containing protein 15-like. (225 aa)
LOC107787358DNA excision repair protein ERCC-1-like. (393 aa)
LOC107790515Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (736 aa)
LOC107791025ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (911 aa)
LOC107791433DNA repair protein RAD51 homolog 2-like isoform X1. (371 aa)
LOC107791600Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. (353 aa)
LOC107791766Crossover junction endonuclease MUS81-like. (657 aa)
LOC107794086Regulator of telomere elongation helicase 1-like isoform X1. (1042 aa)
LOC107794364Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. (355 aa)
LOC107796665Mitogen-activated protein kinase kinase kinase YODA-like; Belongs to the protein kinase superfamily. (412 aa)
LOC107797609DNA repair protein RAD50-like. (157 aa)
LOC107797994Exonuclease 1-like isoform X1. (543 aa)
LOC107800461DNA repair protein RAD50. (1314 aa)
LOC107801586Flap endonuclease GEN-like 1 isoform X1. (602 aa)
LOC107804394Uncharacterized protein LOC107804394. (248 aa)
LOC107805500Uncharacterized protein LOC107805500. (448 aa)
LOC107805527LOB domain-containing protein 15-like. (227 aa)
LOC107806596DNA repair protein RAD51 homolog 4. (315 aa)
LOC107809588Uncharacterized protein LOC107809588. (199 aa)
LOC107810192DNA repair protein recA homolog 1, chloroplastic-like isoform X1; Belongs to the RecA family. (419 aa)
LOC107810216Meiotic recombination protein DMC1 homolog isoform X1; Belongs to the RecA family. (341 aa)
LOC107810733DNA repair endonuclease UVH1. (953 aa)
LOC107811994Exonuclease 1-like isoform X1. (543 aa)
LOC107812739BRCA1-associated RING domain protein 1. (687 aa)
LOC107813256ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (801 aa)
LOC107813348Uncharacterized protein LOC107813348. (1054 aa)
LOC107814297ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (649 aa)
LOC107814336DNA topoisomerase 1-like isoform X1. (1172 aa)
LOC107814562ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (878 aa)
LOC107815904DNA repair protein RAD51 homolog 3-like isoform X1. (357 aa)
LOC107816534Pectinesterase. (338 aa)
LOC107816608Fanconi anemia group J protein homolog. (1280 aa)
LOC107816718DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (864 aa)
LOC107817043Uncharacterized protein LOC107817043 isoform X1. (212 aa)
LOC107817060Uncharacterized protein LOC107817060 isoform X1. (995 aa)
LOC107816977DNA repair protein recA homolog 1, chloroplastic-like isoform X1; Belongs to the RecA family. (419 aa)
LOC107818123Uncharacterized protein LOC107818123 isoform X1. (1046 aa)
LOC107818336Tudor domain-containing protein 3-like isoform X1. (415 aa)
LOC107818748DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (863 aa)
LOC107819394DNA repair protein XRCC3 homolog. (281 aa)
LOC107819652BRCA1-associated RING domain protein 1-like. (466 aa)
LOC107820410DNA repair protein XRCC2 homolog isoform X1. (333 aa)
LOC107820519BRCA1-associated RING domain protein 1-like. (466 aa)
LOC107821048ATP-dependent DNA helicase Q-like 4A isoform X1. (1185 aa)
LOC107821379Uncharacterized protein LOC107821379 isoform X1. (212 aa)
LOC107821610DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1. (1382 aa)
LOC1078220665'-3' exonuclease-like. (379 aa)
LOC107824176Fanconi anemia group M protein homolog. (770 aa)
LOC107824417DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (551 aa)
LOC107824884DNA topoisomerase 1-like isoform X1. (1010 aa)
LOC107825713Tudor domain-containing protein 3-like. (415 aa)
LOC107827628DNA repair protein RAD51 homolog 2-like isoform X1. (463 aa)
LOC107828155Serine/threonine-protein kinase ATM-like; Belongs to the PI3/PI4-kinase family. (1908 aa)
LOC107828159Serine/threonine-protein kinase ATM-like isoform X1. (588 aa)
LOC107829397Nijmegen breakage syndrome 1 protein-like. (562 aa)
LOC107830439Crossover junction endonuclease MUS81-like. (657 aa)
LOC107831709DNA repair protein XRCC2 homolog isoform X1. (339 aa)
LOC107831770DNA repair protein XRCC3 homolog. (281 aa)
LOC107832233ATP-dependent DNA helicase RecQ-like. (209 aa)
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (18%) [HD]