(13 nodes) Mixed, incl. Restriction endonuclease type II-like, and DNA topoisomerase I, type IA network (Nicotiana tabacum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107761513	Uncharacterized protein LOC107761513. (201 aa)
	LOC107762548	LOB domain-containing protein 15-like. (231 aa)
	LOC107776580	DNA excision repair protein ERCC-1-like. (399 aa)
	LOC107777170	Uncharacterized protein LOC107777170. (341 aa)
	LOC107787358	DNA excision repair protein ERCC-1-like. (393 aa)
	LOC107791025	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (911 aa)
	LOC107791766	Crossover junction endonuclease MUS81-like. (657 aa)
	LOC107810733	DNA repair endonuclease UVH1. (953 aa)
	LOC107814336	DNA topoisomerase 1-like isoform X1. (1172 aa)
	LOC107817060	Uncharacterized protein LOC107817060 isoform X1. (995 aa)
	LOC107818336	Tudor domain-containing protein 3-like isoform X1. (415 aa)
	LOC107821379	Uncharacterized protein LOC107821379 isoform X1. (212 aa)
	LOC107830439	Crossover junction endonuclease MUS81-like. (657 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107761513	LOC107762548	A0A1S3X683	A0A1S3X9B5	Uncharacterized protein LOC107761513.	LOB domain-containing protein 15-like.	0.882
LOC107761513	LOC107776580	A0A1S3X683	A0A1S3YIC2	Uncharacterized protein LOC107761513.	DNA excision repair protein ERCC-1-like.	0.918
LOC107761513	LOC107777170	A0A1S3X683	A0A1S3YKS7	Uncharacterized protein LOC107761513.	Uncharacterized protein LOC107777170.	0.955
LOC107761513	LOC107787358	A0A1S3X683	A0A1S3ZIU6	Uncharacterized protein LOC107761513.	DNA excision repair protein ERCC-1-like.	0.918
LOC107761513	LOC107791025	A0A1S3X683	A0A1S3ZVZ3	Uncharacterized protein LOC107761513.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.819
LOC107761513	LOC107791766	A0A1S3X683	A0A1S3ZYF4	Uncharacterized protein LOC107761513.	Crossover junction endonuclease MUS81-like.	0.954
LOC107761513	LOC107810733	A0A1S3X683	A0A1S4BQ74	Uncharacterized protein LOC107761513.	DNA repair endonuclease UVH1.	0.955
LOC107761513	LOC107814336	A0A1S3X683	A0A1S4C2F4	Uncharacterized protein LOC107761513.	DNA topoisomerase 1-like isoform X1.	0.648
LOC107761513	LOC107817060	A0A1S3X683	A0A1S4CB25	Uncharacterized protein LOC107761513.	Uncharacterized protein LOC107817060 isoform X1.	0.509
LOC107761513	LOC107818336	A0A1S3X683	A0A1S4CF59	Uncharacterized protein LOC107761513.	Tudor domain-containing protein 3-like isoform X1.	0.661
LOC107761513	LOC107830439	A0A1S3X683	A0A1S4DJ93	Uncharacterized protein LOC107761513.	Crossover junction endonuclease MUS81-like.	0.954
LOC107762548	LOC107761513	A0A1S3X9B5	A0A1S3X683	LOB domain-containing protein 15-like.	Uncharacterized protein LOC107761513.	0.882
LOC107762548	LOC107776580	A0A1S3X9B5	A0A1S3YIC2	LOB domain-containing protein 15-like.	DNA excision repair protein ERCC-1-like.	0.715
LOC107762548	LOC107777170	A0A1S3X9B5	A0A1S3YKS7	LOB domain-containing protein 15-like.	Uncharacterized protein LOC107777170.	0.751
LOC107762548	LOC107787358	A0A1S3X9B5	A0A1S3ZIU6	LOB domain-containing protein 15-like.	DNA excision repair protein ERCC-1-like.	0.715
LOC107762548	LOC107791025	A0A1S3X9B5	A0A1S3ZVZ3	LOB domain-containing protein 15-like.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.845
LOC107762548	LOC107791766	A0A1S3X9B5	A0A1S3ZYF4	LOB domain-containing protein 15-like.	Crossover junction endonuclease MUS81-like.	0.768
LOC107762548	LOC107810733	A0A1S3X9B5	A0A1S4BQ74	LOB domain-containing protein 15-like.	DNA repair endonuclease UVH1.	0.751
LOC107762548	LOC107814336	A0A1S3X9B5	A0A1S4C2F4	LOB domain-containing protein 15-like.	DNA topoisomerase 1-like isoform X1.	0.656
LOC107762548	LOC107817060	A0A1S3X9B5	A0A1S4CB25	LOB domain-containing protein 15-like.	Uncharacterized protein LOC107817060 isoform X1.	0.416