STRINGSTRING
LOC107759736 LOC107759736 LOC107761107 LOC107761107 LOC107763564 LOC107763564 LOC107767854 LOC107767854 LOC107767930 LOC107767930 LOC107769260 LOC107769260 LOC107769653 LOC107769653 LOC107775817 LOC107775817 LOC107782760 LOC107782760 LOC107784606 LOC107784606 LOC107785213 LOC107785213 LOC107786522 LOC107786522 LOC107786534 LOC107786534 LOC107791414 LOC107791414 LOC107793857 LOC107793857 LOC107797361 LOC107797361 LOC107798409 LOC107798409 LOC107799069 LOC107799069 LOC107801240 LOC107801240 LOC107802689 LOC107802689 LOC107806663 LOC107806663 LOC107807144 LOC107807144 LOC107807583 LOC107807583 LOC107809255 LOC107809255 LOC107809646 LOC107809646 LOC107810129 LOC107810129 LOC107810677 LOC107810677 LOC107816375 LOC107816375 LOC107819396 LOC107819396 LOC107820058 LOC107820058 LOC107823977 LOC107823977 LOC107826039 LOC107826039 LOC107826943 LOC107826943 LOC107829766 LOC107829766 LOC107829718 LOC107829718 ubc2-1 ubc2-1 LOC107803861 LOC107803861
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107759736ubiquitin-60S ribosomal protein L40. (128 aa)
LOC107761107E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (414 aa)
LOC107763564LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL3-like. (1845 aa)
LOC107767854ubiquitin-60S ribosomal protein L40. (128 aa)
LOC107767930Ubiquitin-conjugating enzyme E2 7-like; Belongs to the ubiquitin-conjugating enzyme family. (169 aa)
LOC107769260Polyubiquitin 11. (186 aa)
LOC107769653Uncharacterized protein LOC107769653 isoform X1. (410 aa)
LOC107775817Ubiquitin-conjugating enzyme E2 2-like isoform X1. (156 aa)
LOC107782760E3 ubiquitin-protein ligase UPL3-like. (1268 aa)
LOC107784606Ubiquitin-conjugating enzyme E2 7 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. (159 aa)
LOC107785213E3 ubiquitin-protein ligase UPL4-like isoform X1. (1541 aa)
LOC107786522Ubiquitin-activating enzyme E1 1-like; Belongs to the ubiquitin-activating E1 family. (1080 aa)
LOC107786534Ubiquitin-conjugating enzyme E2 27-like. (81 aa)
LOC107791414E3 ubiquitin-protein ligase UPL3-like. (908 aa)
LOC107793857Ubiquitin-activating enzyme E1 1-like; Belongs to the ubiquitin-activating E1 family. (1092 aa)
LOC107797361E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1887 aa)
LOC107798409E3 ubiquitin-protein ligase UPL3-like. (848 aa)
LOC107799069ubiquitin-40S ribosomal protein S27a-like. (156 aa)
LOC107801240BTB/POZ domain-containing protein At2g30600-like isoform X1. (826 aa)
LOC107802689Ubiquitin-like isoform X1. (129 aa)
LOC107806663BTB/POZ domain-containing protein At2g30600-like isoform X1. (824 aa)
LOC107807144Phosphatidylinositol 4-kinase gamma 4-like; Belongs to the PI3/PI4-kinase family. (584 aa)
LOC107807583NEDD8-activating enzyme E1 catalytic subunit-like. (186 aa)
LOC107809255Ubiquitin-conjugating enzyme E2 7-like; Belongs to the ubiquitin-conjugating enzyme family. (109 aa)
LOC107809646Uncharacterized protein LOC107809646 isoform X1. (412 aa)
LOC107810129E3 ubiquitin-protein ligase PRT1. (432 aa)
LOC107810677Ubiquitin-conjugating enzyme E2 27-like. (113 aa)
LOC107816375Ubiquitin-activating enzyme E1 1-like; Belongs to the ubiquitin-activating E1 family. (1080 aa)
LOC107819396Ubiquitin-conjugating enzyme E2 7 isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (168 aa)
LOC107820058E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (2050 aa)
LOC107823977ubiquitin-NEDD8-like protein RUB2 isoform X1. (154 aa)
LOC107826039E3 ubiquitin-protein ligase UPL3-like. (399 aa)
LOC107826943E3 ubiquitin-protein ligase UPL3-like. (92 aa)
LOC107829766Ubiquitin-activating enzyme E1 1-like; Belongs to the ubiquitin-activating E1 family. (1092 aa)
LOC107829718E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1704 aa)
ubc2-1Ubiquitin-conjugating enzyme E2 2 isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
LOC107803861Ubiquitin-conjugating enzyme E2 27-like; Belongs to the ubiquitin-conjugating enzyme family. (192 aa)
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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