STRINGSTRING
LOC107759736 LOC107759736 LOC107767854 LOC107767854 LOC107767930 LOC107767930 LOC107769653 LOC107769653 LOC107784606 LOC107784606 LOC107786522 LOC107786522 LOC107786534 LOC107786534 LOC107791414 LOC107791414 LOC107793857 LOC107793857 LOC107798409 LOC107798409 LOC107799069 LOC107799069 LOC107802689 LOC107802689 LOC107807144 LOC107807144 LOC107810129 LOC107810129 LOC107816375 LOC107816375 LOC107819396 LOC107819396 LOC107823977 LOC107823977 LOC107803861 LOC107803861
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107759736ubiquitin-60S ribosomal protein L40. (128 aa)
LOC107767854ubiquitin-60S ribosomal protein L40. (128 aa)
LOC107767930Ubiquitin-conjugating enzyme E2 7-like; Belongs to the ubiquitin-conjugating enzyme family. (169 aa)
LOC107769653Uncharacterized protein LOC107769653 isoform X1. (410 aa)
LOC107784606Ubiquitin-conjugating enzyme E2 7 isoform X2; Belongs to the ubiquitin-conjugating enzyme family. (159 aa)
LOC107786522Ubiquitin-activating enzyme E1 1-like; Belongs to the ubiquitin-activating E1 family. (1080 aa)
LOC107786534Ubiquitin-conjugating enzyme E2 27-like. (81 aa)
LOC107791414E3 ubiquitin-protein ligase UPL3-like. (908 aa)
LOC107793857Ubiquitin-activating enzyme E1 1-like; Belongs to the ubiquitin-activating E1 family. (1092 aa)
LOC107798409E3 ubiquitin-protein ligase UPL3-like. (848 aa)
LOC107799069ubiquitin-40S ribosomal protein S27a-like. (156 aa)
LOC107802689Ubiquitin-like isoform X1. (129 aa)
LOC107807144Phosphatidylinositol 4-kinase gamma 4-like; Belongs to the PI3/PI4-kinase family. (584 aa)
LOC107810129E3 ubiquitin-protein ligase PRT1. (432 aa)
LOC107816375Ubiquitin-activating enzyme E1 1-like; Belongs to the ubiquitin-activating E1 family. (1080 aa)
LOC107819396Ubiquitin-conjugating enzyme E2 7 isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (168 aa)
LOC107823977ubiquitin-NEDD8-like protein RUB2 isoform X1. (154 aa)
LOC107803861Ubiquitin-conjugating enzyme E2 27-like; Belongs to the ubiquitin-conjugating enzyme family. (192 aa)
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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