STRINGSTRING
LOC107762120 LOC107762120 LOC107762516 LOC107762516 LOC107764724 LOC107764724 LOC107765637 LOC107765637 LOC107768283 LOC107768283 LOC107769877 LOC107769877 LOC107772482 LOC107772482 LOC107775353 LOC107775353 LOC107777093 LOC107777093 LOC107777096 LOC107777096 LOC107777787 LOC107777787 LOC107779020 LOC107779020 LOC107779317 LOC107779317 LOC107780697 LOC107780697 LOC107781009 LOC107781009 LOC107782652 LOC107782652 LOC107785039 LOC107785039 LOC107786310 LOC107786310 LOC107788893 LOC107788893 LOC107790215 LOC107790215 LOC107791972 LOC107791972 LOC107792024 LOC107792024 LOC107793854 LOC107793854 LOC107795963 LOC107795963 LOC107796022 LOC107796022 LOC107796991 LOC107796991 LOC107798399 LOC107798399 LOC107800862 LOC107800862 LOC107801952 LOC107801952 LOC107802397 LOC107802397 LOC107804672 LOC107804672 LOC107807360 LOC107807360 LOC107808627 LOC107808627 LOC107811333 LOC107811333 LOC107813446 LOC107813446 LOC107818696 LOC107818696 LOC107820703 LOC107820703 LOC107821552 LOC107821552 LOC107823761 LOC107823761 LOC107825975 LOC107825975 LOC107828340 LOC107828340 LOC107829068 LOC107829068 LOC107829442 LOC107829442 LOC107830417 LOC107830417 LOC107832006 LOC107832006 LOC107832193 LOC107832193 NtFib1 NtFib1 MARBPF MARBPF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107762120rRNA-processing protein FCF1 homolog. (198 aa)
LOC107762516WD repeat-containing protein 75-like. (801 aa)
LOC107764724U3 small nucleolar ribonucleoprotein protein MPP10-like. (119 aa)
LOC107765637U3 small nucleolar RNA-associated protein 18 homolog. (553 aa)
LOC107768283WD repeat-containing protein 3-like. (950 aa)
LOC107769877LOW QUALITY PROTEIN: nucleolar protein 6-like. (1111 aa)
LOC107772482U3 small nucleolar ribonucleoprotein protein IMP3-like. (182 aa)
LOC107775353Brix domain-containing protein ZK795.3-like. (156 aa)
LOC107777093Nucleolar protein 6. (1052 aa)
LOC107777096Ribosome biogenesis protein BMS1 homolog. (1013 aa)
LOC107777787rRNA biogenesis protein RRP5-like. (508 aa)
LOC107779020Mediator of RNA polymerase II transcription subunit 36a-like. (314 aa)
LOC107779317KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (396 aa)
LOC107780697U3 snoRNP-associated protein-like YAOH. (517 aa)
LOC107781009Ribosome biogenesis protein BMS1 homolog. (178 aa)
LOC107782652Uncharacterized protein LOC107782652 isoform X1. (626 aa)
LOC107785039Transducin beta-like protein 3. (862 aa)
LOC107786310U3 small nucleolar ribonucleoprotein protein IMP4-like. (284 aa)
LOC107788893Protein SLOW WALKER 1-like. (533 aa)
LOC107790215DEAD-box ATP-dependent RNA helicase 42-like isoform X1. (334 aa)
LOC107791972Nucleolar protein 14-like. (173 aa)
LOC107792024U3 small nucleolar RNA-associated protein 21 homolog. (907 aa)
LOC107793854U3 small nucleolar RNA-associated protein 4 homolog. (820 aa)
LOC107795963Uncharacterized protein At3g06530 isoform X1. (2150 aa)
LOC107796022WD repeat-containing protein 43-like isoform X1. (604 aa)
LOC107796991Nucleolar protein 56-like. (548 aa)
LOC107798399U3 small nucleolar RNA-associated protein 18 homolog. (500 aa)
LOC107800862Protein SLOW WALKER 1-like. (533 aa)
LOC107801952U3 small nucleolar RNA-associated protein 4 homolog. (820 aa)
LOC107802397U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (548 aa)
LOC107804672Probable U3 small nucleolar RNA-associated protein 7. (535 aa)
LOC107807360U3 small nucleolar RNA-associated protein 6 homolog isoform X1. (649 aa)
LOC107808627Neuroguidin-like isoform X1. (317 aa)
LOC107811333Something about silencing protein 10-like isoform X1. (657 aa)
LOC107813446Probable nucleolar protein 5-2. (558 aa)
LOC107818696WD repeat-containing protein 3-like. (952 aa)
LOC107820703Nucleolar complex protein 4 homolog B. (611 aa)
LOC107821552Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (158 aa)
LOC107823761U3 small nucleolar RNA-associated protein 6 homolog. (650 aa)
LOC107825975Nucleolar protein 56-like. (554 aa)
LOC107828340Nucleolar protein 10. (684 aa)
LOC107829068Transducin beta-like protein 3. (873 aa)
LOC107829442Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
LOC107830417U3 snoRNP-associated protein-like YAOH. (517 aa)
LOC107832006U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (229 aa)
LOC107832193Periodic tryptophan protein 2 homolog. (896 aa)
NtFib1Mediator of RNA polymerase II transcription subunit 36a-like. (314 aa)
MARBPFProbable nucleolar protein 5-2. (555 aa)
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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