STRINGSTRING
LOC107762120 LOC107762120 LOC107765637 LOC107765637 LOC107768283 LOC107768283 LOC107772482 LOC107772482 LOC107777093 LOC107777093 LOC107777096 LOC107777096 LOC107779317 LOC107779317 LOC107780697 LOC107780697 LOC107782652 LOC107782652 LOC107785039 LOC107785039 LOC107786310 LOC107786310 LOC107788893 LOC107788893 LOC107790215 LOC107790215 LOC107792024 LOC107792024 LOC107795963 LOC107795963 LOC107801952 LOC107801952 LOC107802397 LOC107802397 LOC107804672 LOC107804672 LOC107807360 LOC107807360 LOC107808627 LOC107808627 LOC107811333 LOC107811333 LOC107832006 LOC107832006
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107762120rRNA-processing protein FCF1 homolog. (198 aa)
LOC107765637U3 small nucleolar RNA-associated protein 18 homolog. (553 aa)
LOC107768283WD repeat-containing protein 3-like. (950 aa)
LOC107772482U3 small nucleolar ribonucleoprotein protein IMP3-like. (182 aa)
LOC107777093Nucleolar protein 6. (1052 aa)
LOC107777096Ribosome biogenesis protein BMS1 homolog. (1013 aa)
LOC107779317KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (396 aa)
LOC107780697U3 snoRNP-associated protein-like YAOH. (517 aa)
LOC107782652Uncharacterized protein LOC107782652 isoform X1. (626 aa)
LOC107785039Transducin beta-like protein 3. (862 aa)
LOC107786310U3 small nucleolar ribonucleoprotein protein IMP4-like. (284 aa)
LOC107788893Protein SLOW WALKER 1-like. (533 aa)
LOC107790215DEAD-box ATP-dependent RNA helicase 42-like isoform X1. (334 aa)
LOC107792024U3 small nucleolar RNA-associated protein 21 homolog. (907 aa)
LOC107795963Uncharacterized protein At3g06530 isoform X1. (2150 aa)
LOC107801952U3 small nucleolar RNA-associated protein 4 homolog. (820 aa)
LOC107802397U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (548 aa)
LOC107804672Probable U3 small nucleolar RNA-associated protein 7. (535 aa)
LOC107807360U3 small nucleolar RNA-associated protein 6 homolog isoform X1. (649 aa)
LOC107808627Neuroguidin-like isoform X1. (317 aa)
LOC107811333Something about silencing protein 10-like isoform X1. (657 aa)
LOC107832006U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (229 aa)
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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