(10 nodes) Mixed, incl. Pwp2p-containing subcomplex of 90S preribosome, and NOL6/Upt22 network (Nicotiana tabacum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107765637	U3 small nucleolar RNA-associated protein 18 homolog. (553 aa)
	LOC107768283	WD repeat-containing protein 3-like. (950 aa)
	LOC107777093	Nucleolar protein 6. (1052 aa)
	LOC107780697	U3 snoRNP-associated protein-like YAOH. (517 aa)
	LOC107785039	Transducin beta-like protein 3. (862 aa)
	LOC107788893	Protein SLOW WALKER 1-like. (533 aa)
	LOC107792024	U3 small nucleolar RNA-associated protein 21 homolog. (907 aa)
	LOC107795963	Uncharacterized protein At3g06530 isoform X1. (2150 aa)
	LOC107804672	Probable U3 small nucleolar RNA-associated protein 7. (535 aa)
	LOC107807360	U3 small nucleolar RNA-associated protein 6 homolog isoform X1. (649 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107765637	LOC107768283	A0A1S3XIW1	A0A1S3XSF3	U3 small nucleolar RNA-associated protein 18 homolog.	WD repeat-containing protein 3-like.	0.998
LOC107765637	LOC107777093	A0A1S3XIW1	A0A1S3YJZ5	U3 small nucleolar RNA-associated protein 18 homolog.	Nucleolar protein 6.	0.995
LOC107765637	LOC107780697	A0A1S3XIW1	A0A1S3YXE6	U3 small nucleolar RNA-associated protein 18 homolog.	U3 snoRNP-associated protein-like YAOH.	0.996
LOC107765637	LOC107785039	A0A1S3XIW1	A0A1S3ZBM3	U3 small nucleolar RNA-associated protein 18 homolog.	Transducin beta-like protein 3.	0.998
LOC107765637	LOC107788893	A0A1S3XIW1	A0A1S3ZP21	U3 small nucleolar RNA-associated protein 18 homolog.	Protein SLOW WALKER 1-like.	0.995
LOC107765637	LOC107792024	A0A1S3XIW1	A0A1S3ZZA7	U3 small nucleolar RNA-associated protein 18 homolog.	U3 small nucleolar RNA-associated protein 21 homolog.	0.999
LOC107765637	LOC107795963	A0A1S3XIW1	A0A1S4ABX4	U3 small nucleolar RNA-associated protein 18 homolog.	Uncharacterized protein At3g06530 isoform X1.	0.996
LOC107765637	LOC107804672	A0A1S3XIW1	A0A1S4B6A2	U3 small nucleolar RNA-associated protein 18 homolog.	Probable U3 small nucleolar RNA-associated protein 7.	0.998
LOC107765637	LOC107807360	A0A1S3XIW1	A0A1S4BEC0	U3 small nucleolar RNA-associated protein 18 homolog.	U3 small nucleolar RNA-associated protein 6 homolog isoform X1.	0.997
LOC107768283	LOC107765637	A0A1S3XSF3	A0A1S3XIW1	WD repeat-containing protein 3-like.	U3 small nucleolar RNA-associated protein 18 homolog.	0.998
LOC107768283	LOC107777093	A0A1S3XSF3	A0A1S3YJZ5	WD repeat-containing protein 3-like.	Nucleolar protein 6.	0.998
LOC107768283	LOC107780697	A0A1S3XSF3	A0A1S3YXE6	WD repeat-containing protein 3-like.	U3 snoRNP-associated protein-like YAOH.	0.991
LOC107768283	LOC107785039	A0A1S3XSF3	A0A1S3ZBM3	WD repeat-containing protein 3-like.	Transducin beta-like protein 3.	0.998
LOC107768283	LOC107788893	A0A1S3XSF3	A0A1S3ZP21	WD repeat-containing protein 3-like.	Protein SLOW WALKER 1-like.	0.996
LOC107768283	LOC107792024	A0A1S3XSF3	A0A1S3ZZA7	WD repeat-containing protein 3-like.	U3 small nucleolar RNA-associated protein 21 homolog.	0.999
LOC107768283	LOC107795963	A0A1S3XSF3	A0A1S4ABX4	WD repeat-containing protein 3-like.	Uncharacterized protein At3g06530 isoform X1.	0.999
LOC107768283	LOC107804672	A0A1S3XSF3	A0A1S4B6A2	WD repeat-containing protein 3-like.	Probable U3 small nucleolar RNA-associated protein 7.	0.996
LOC107768283	LOC107807360	A0A1S3XSF3	A0A1S4BEC0	WD repeat-containing protein 3-like.	U3 small nucleolar RNA-associated protein 6 homolog isoform X1.	0.999
LOC107777093	LOC107765637	A0A1S3YJZ5	A0A1S3XIW1	Nucleolar protein 6.	U3 small nucleolar RNA-associated protein 18 homolog.	0.995
LOC107777093	LOC107768283	A0A1S3YJZ5	A0A1S3XSF3	Nucleolar protein 6.	WD repeat-containing protein 3-like.	0.998