(6 nodes) Pwp2p-containing subcomplex of 90S preribosome, and NOL6/Upt22 network (Nicotiana tabacum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107762516	WD repeat-containing protein 75-like. (801 aa)
	LOC107769877	LOW QUALITY PROTEIN: nucleolar protein 6-like. (1111 aa)
	LOC107818696	WD repeat-containing protein 3-like. (952 aa)
	LOC107823761	U3 small nucleolar RNA-associated protein 6 homolog. (650 aa)
	LOC107829068	Transducin beta-like protein 3. (873 aa)
	LOC107832193	Periodic tryptophan protein 2 homolog. (896 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107762516	LOC107769877	A0A1S3X8Z0	A0A1S3XY25	WD repeat-containing protein 75-like.	LOW QUALITY PROTEIN: nucleolar protein 6-like.	0.999
LOC107762516	LOC107818696	A0A1S3X8Z0	A0A1S4CGB5	WD repeat-containing protein 75-like.	WD repeat-containing protein 3-like.	0.998
LOC107762516	LOC107823761	A0A1S3X8Z0	A0A1S4CXU1	WD repeat-containing protein 75-like.	U3 small nucleolar RNA-associated protein 6 homolog.	0.999
LOC107762516	LOC107829068	A0A1S3X8Z0	A0A1S4DEV5	WD repeat-containing protein 75-like.	Transducin beta-like protein 3.	0.998
LOC107762516	LOC107832193	A0A1S3X8Z0	A0A1S4DPY7	WD repeat-containing protein 75-like.	Periodic tryptophan protein 2 homolog.	0.999
LOC107769877	LOC107762516	A0A1S3XY25	A0A1S3X8Z0	LOW QUALITY PROTEIN: nucleolar protein 6-like.	WD repeat-containing protein 75-like.	0.999
LOC107769877	LOC107818696	A0A1S3XY25	A0A1S4CGB5	LOW QUALITY PROTEIN: nucleolar protein 6-like.	WD repeat-containing protein 3-like.	0.998
LOC107769877	LOC107823761	A0A1S3XY25	A0A1S4CXU1	LOW QUALITY PROTEIN: nucleolar protein 6-like.	U3 small nucleolar RNA-associated protein 6 homolog.	0.999
LOC107769877	LOC107829068	A0A1S3XY25	A0A1S4DEV5	LOW QUALITY PROTEIN: nucleolar protein 6-like.	Transducin beta-like protein 3.	0.998
LOC107769877	LOC107832193	A0A1S3XY25	A0A1S4DPY7	LOW QUALITY PROTEIN: nucleolar protein 6-like.	Periodic tryptophan protein 2 homolog.	0.999
LOC107818696	LOC107762516	A0A1S4CGB5	A0A1S3X8Z0	WD repeat-containing protein 3-like.	WD repeat-containing protein 75-like.	0.998
LOC107818696	LOC107769877	A0A1S4CGB5	A0A1S3XY25	WD repeat-containing protein 3-like.	LOW QUALITY PROTEIN: nucleolar protein 6-like.	0.998
LOC107818696	LOC107823761	A0A1S4CGB5	A0A1S4CXU1	WD repeat-containing protein 3-like.	U3 small nucleolar RNA-associated protein 6 homolog.	0.999
LOC107818696	LOC107829068	A0A1S4CGB5	A0A1S4DEV5	WD repeat-containing protein 3-like.	Transducin beta-like protein 3.	0.998
LOC107818696	LOC107832193	A0A1S4CGB5	A0A1S4DPY7	WD repeat-containing protein 3-like.	Periodic tryptophan protein 2 homolog.	0.999
LOC107823761	LOC107762516	A0A1S4CXU1	A0A1S3X8Z0	U3 small nucleolar RNA-associated protein 6 homolog.	WD repeat-containing protein 75-like.	0.999
LOC107823761	LOC107769877	A0A1S4CXU1	A0A1S3XY25	U3 small nucleolar RNA-associated protein 6 homolog.	LOW QUALITY PROTEIN: nucleolar protein 6-like.	0.999
LOC107823761	LOC107818696	A0A1S4CXU1	A0A1S4CGB5	U3 small nucleolar RNA-associated protein 6 homolog.	WD repeat-containing protein 3-like.	0.999
LOC107823761	LOC107829068	A0A1S4CXU1	A0A1S4DEV5	U3 small nucleolar RNA-associated protein 6 homolog.	Transducin beta-like protein 3.	0.998
LOC107823761	LOC107832193	A0A1S4CXU1	A0A1S4DPY7	U3 small nucleolar RNA-associated protein 6 homolog.	Periodic tryptophan protein 2 homolog.	0.999