5 items (Nicotiana tabacum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107761804	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like. (658 aa)
	LOC107775017	Uncharacterized protein LOC107775017. (68 aa)
	LOC107787702	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like. (658 aa)
	orf138c	Uncharacterized protein. (138 aa)
	orf166a	Uncharacterized protein. (166 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107761804	orf138c	A0A1S3X6G2	Q5M9R1	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like.	Uncharacterized protein.	0.554
LOC107761804	orf166a	A0A1S3X6G2	Q5M9X8	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like.	Uncharacterized protein.	0.543
LOC107775017	orf138c	A0A1S3YD49	Q5M9R1	Uncharacterized protein LOC107775017.	Uncharacterized protein.	0.434
LOC107775017	orf166a	A0A1S3YD49	Q5M9X8	Uncharacterized protein LOC107775017.	Uncharacterized protein.	0.434
LOC107787702	orf138c	A0A1S3ZKA4	Q5M9R1	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like.	Uncharacterized protein.	0.554
LOC107787702	orf166a	A0A1S3ZKA4	Q5M9X8	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like.	Uncharacterized protein.	0.543
orf138c	LOC107761804	Q5M9R1	A0A1S3X6G2	Uncharacterized protein.	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like.	0.554
orf138c	LOC107775017	Q5M9R1	A0A1S3YD49	Uncharacterized protein.	Uncharacterized protein LOC107775017.	0.434
orf138c	LOC107787702	Q5M9R1	A0A1S3ZKA4	Uncharacterized protein.	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like.	0.554
orf138c	orf166a	Q5M9R1	Q5M9X8	Uncharacterized protein.	Uncharacterized protein.	0.568
orf166a	LOC107761804	Q5M9X8	A0A1S3X6G2	Uncharacterized protein.	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like.	0.543
orf166a	LOC107775017	Q5M9X8	A0A1S3YD49	Uncharacterized protein.	Uncharacterized protein LOC107775017.	0.434
orf166a	LOC107787702	Q5M9X8	A0A1S3ZKA4	Uncharacterized protein.	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like.	0.543
orf166a	orf138c	Q5M9X8	Q5M9R1	Uncharacterized protein.	Uncharacterized protein.	0.568