30 items (Nicotiana tabacum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107775142	pre-mRNA-processing factor 19 homolog 1-like. (521 aa)
	LOC107769884	pre-mRNA-processing factor 19 homolog 1-like. (521 aa)
	LOC107767972	Crooked neck-like protein 1. (184 aa)
	LOC107765024	Protein CWC15 homolog. (231 aa)
	LOC107810796	Zinc finger CCCH domain-containing protein 49-like. (476 aa)
	LOC107812596	pre-mRNA-splicing factor ISY1 homolog. (298 aa)
	LOC107813591	pre-mRNA-splicing factor ISY1 homolog. (314 aa)
	LOC107815181	pre-mRNA-splicing factor syf2-like. (310 aa)
	LOC107819808	pre-mRNA-splicing factor SYF1-like. (914 aa)
	LOC107827641	pre-mRNA-splicing factor SPF27 homolog. (250 aa)
	LOC107764234	pre-mRNA-processing factor 19-like isoform X1. (523 aa)
	LOC107829091	Protein pleiotropic regulatory locus 1-like. (87 aa)
	LOC107832805	Cell division cycle 5-like protein. (106 aa)
	LOC107763847	pre-mRNA-splicing factor SPF27 homolog. (250 aa)
	LOC107763122	pre-mRNA-splicing factor SYF1-like. (914 aa)
	LOC107759280	Zinc finger CCCH domain-containing protein 49-like. (477 aa)
	LOC107790486	Crooked neck-like protein 1. (775 aa)
	LOC107808480	pre-mRNA-processing factor 19-like isoform X1. (521 aa)
	LOC107807944	Zinc finger CCCH domain-containing protein 49-like. (478 aa)
	LOC107806034	Protein pleiotropic regulatory locus 1-like. (341 aa)
	LOC107802168	Zinc finger CCCH domain-containing protein 49-like isoform X1. (478 aa)
	LOC107798658	Protein pleiotropic regulatory locus 1-like. (483 aa)
	LOC107795791	Protein CWC15 homolog. (232 aa)
	LOC107810185	Protein pleiotropic regulatory locus 1-like. (483 aa)
	LOC107786751	pre-mRNA-splicing factor syf2-like. (310 aa)
	LOC107784675	pre-mRNA-splicing factor SPF27 homolog. (250 aa)
	LOC107783476	Protein CWC15 homolog. (224 aa)
	LOC107781942	Crooked neck-like protein 1. (693 aa)
	LOC107779232	Cell division cycle 5-like protein. (842 aa)
	LOC107776611	Crooked neck-like protein 1. (511 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107759280	LOC107763122	A0A1S3WYM9	A0A1S3XAT8	Zinc finger CCCH domain-containing protein 49-like.	pre-mRNA-splicing factor SYF1-like.	0.988
LOC107759280	LOC107763847	A0A1S3WYM9	A0A1S3XDB9	Zinc finger CCCH domain-containing protein 49-like.	pre-mRNA-splicing factor SPF27 homolog.	0.938
LOC107759280	LOC107764234	A0A1S3WYM9	A0A1S3XET0	Zinc finger CCCH domain-containing protein 49-like.	pre-mRNA-processing factor 19-like isoform X1.	0.926
LOC107759280	LOC107765024	A0A1S3WYM9	A0A1S3XGK7	Zinc finger CCCH domain-containing protein 49-like.	Protein CWC15 homolog.	0.869
LOC107759280	LOC107767972	A0A1S3WYM9	A0A1S3XSA6	Zinc finger CCCH domain-containing protein 49-like.	Crooked neck-like protein 1.	0.980
LOC107759280	LOC107769884	A0A1S3WYM9	A0A1S3XXF3	Zinc finger CCCH domain-containing protein 49-like.	pre-mRNA-processing factor 19 homolog 1-like.	0.926
LOC107759280	LOC107775142	A0A1S3WYM9	A0A1S3YDV1	Zinc finger CCCH domain-containing protein 49-like.	pre-mRNA-processing factor 19 homolog 1-like.	0.926
LOC107759280	LOC107776611	A0A1S3WYM9	A0A1S3YIF2	Zinc finger CCCH domain-containing protein 49-like.	Crooked neck-like protein 1.	0.980
LOC107759280	LOC107779232	A0A1S3WYM9	A0A1S3YSB1	Zinc finger CCCH domain-containing protein 49-like.	Cell division cycle 5-like protein.	0.967
LOC107759280	LOC107781942	A0A1S3WYM9	A0A1S3Z1B2	Zinc finger CCCH domain-containing protein 49-like.	Crooked neck-like protein 1.	0.980
LOC107759280	LOC107783476	A0A1S3WYM9	A0A1S3Z6C0	Zinc finger CCCH domain-containing protein 49-like.	Protein CWC15 homolog.	0.869
LOC107759280	LOC107784675	A0A1S3WYM9	A0A1S3ZAD6	Zinc finger CCCH domain-containing protein 49-like.	pre-mRNA-splicing factor SPF27 homolog.	0.938
LOC107759280	LOC107786751	A0A1S3WYM9	A0A1S3ZH43	Zinc finger CCCH domain-containing protein 49-like.	pre-mRNA-splicing factor syf2-like.	0.964
LOC107759280	LOC107790486	A0A1S3WYM9	A0A1S3ZU85	Zinc finger CCCH domain-containing protein 49-like.	Crooked neck-like protein 1.	0.980
LOC107759280	LOC107795791	A0A1S3WYM9	A0A1S4ABI4	Zinc finger CCCH domain-containing protein 49-like.	Protein CWC15 homolog.	0.869
LOC107759280	LOC107798658	A0A1S3WYM9	A0A1S4AL43	Zinc finger CCCH domain-containing protein 49-like.	Protein pleiotropic regulatory locus 1-like.	0.945
LOC107759280	LOC107802168	A0A1S3WYM9	A0A1S4AWU8	Zinc finger CCCH domain-containing protein 49-like.	Zinc finger CCCH domain-containing protein 49-like isoform X1.	0.544
LOC107759280	LOC107806034	A0A1S3WYM9	A0A1S4B9T2	Zinc finger CCCH domain-containing protein 49-like.	Protein pleiotropic regulatory locus 1-like.	0.945
LOC107759280	LOC107807944	A0A1S3WYM9	A0A1S4BG98	Zinc finger CCCH domain-containing protein 49-like.	Zinc finger CCCH domain-containing protein 49-like.	0.544
LOC107759280	LOC107808480	A0A1S3WYM9	A0A1S4BI09	Zinc finger CCCH domain-containing protein 49-like.	pre-mRNA-processing factor 19-like isoform X1.	0.926