72 items (Nicotiana tabacum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107800007	Zinc finger protein 4-like. (249 aa)
	LOC107831935	Heptahelical transmembrane protein 1-like. (346 aa)
	LOC107831533	F-box protein SKIP14-like. (503 aa)
	LOC107824824	Serine/threonine-protein kinase EDR1-like. (956 aa)
	LOC107825959	Heptahelical transmembrane protein 1-like. (375 aa)
	LOC107827532	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (331 aa)
	LOC107827556	Protein FREE1. (529 aa)
	LOC107827802	F-box protein SKIP14-like. (483 aa)
	LOC107827989	WD and tetratricopeptide repeats protein 1-like isoform X1. (762 aa)
	LOC107828852	Protein FREE1-like. (537 aa)
	LOC107828702	Protein FREE1-like. (407 aa)
	LOC107831277	20 kDa chaperonin, chloroplastic-like; Belongs to the GroES chaperonin family. (252 aa)
	LOC107759119	20 kDa chaperonin, chloroplastic-like. (252 aa)
	LOC107760336	Probable E3 ubiquitin-protein ligase HERC2. (448 aa)
	LOC107761117	Geranylgeranyl transferase type-1 subunit beta-like. (173 aa)
	LOC107760928	Putative dihydroflavonol-4-reductase isoform X1. (369 aa)
	LOC107761440	Heptahelical transmembrane protein 1-like. (163 aa)
	LOC107769237	Pentatricopeptide repeat-containing protein At5g11310, mitochondrial-like. (602 aa)
	LOC107769079	20 kDa chaperonin, chloroplastic-like; Belongs to the GroES chaperonin family. (252 aa)
	LOC107770388	Probable E3 ubiquitin-protein ligase HERC2. (450 aa)
	LOC107771305	Transcription factor TGA7-like. (249 aa)
	LOC107771519	Uncharacterized zinc finger protein At4g06634-like. (372 aa)
	LOC107771557	Putative dihydroflavonol-4-reductase. (314 aa)
	LOC107772013	Uncharacterized protein LOC107772013. (90 aa)
	LOC107772676	Zinc finger protein 4-like. (211 aa)
	LOC107773078	Pentatricopeptide repeat-containing protein At5g11310, mitochondrial-like. (272 aa)
	LOC107775244	Zinc finger protein 8-like. (261 aa)
	LOC107775308	F-box protein SKIP14-like. (473 aa)
	LOC107775515	E3 ubiquitin-protein ligase KEG-like. (1618 aa)
	LOC107775864	THO complex subunit 6-like isoform X1. (291 aa)
	LOC107777234	Geranylgeranyl transferase type-1 subunit beta isoform X1. (365 aa)
	LOC107777651	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (452 aa)
	LOC107777567	THO complex subunit 6-like. (367 aa)
	LOC107778432	Uncharacterized protein LOC107778432 isoform X1. (93 aa)
	LOC107779829	Uncharacterized protein LOC107779829. (710 aa)
	LOC107828820	Zinc finger protein 8-like. (256 aa)
	LOC107782149	Casein kinase I-like. (283 aa)
	LOC107782927	Transcription factor TGA7-like. (246 aa)
	LOC107783398	Uncharacterized protein LOC107783398. (713 aa)
	LOC107784135	Geranylgeranyl transferase type-1 subunit beta-like. (201 aa)
	LOC107790430	Protein FREE1-like isoform X1. (476 aa)
	LOC107791441	THO complex subunit 6-like. (367 aa)
	LOC107792136	Protein FREE1-like isoform X1. (203 aa)
	LOC107792852	Protein FREE1-like. (308 aa)
	LOC107793431	F-box protein SKIP14-like. (488 aa)
	LOC107796753	Heptahelical transmembrane protein 1-like. (375 aa)
	LOC107797880	Serine/threonine-protein kinase EDR1. (802 aa)
	LOC107798319	Heptahelical transmembrane protein 1-like. (347 aa)
	LOC107798306	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha. (348 aa)
	LOC107801177	Pentatricopeptide repeat-containing protein At5g11310, mitochondrial-like. (608 aa)
	LOC107802184	Zinc finger protein 4-like isoform X1. (247 aa)
	LOC107802454	Zinc finger protein 4-like. (248 aa)
	LOC107802730	G-protein coupled receptor 1-like. (321 aa)
	LOC107803068	Putative dihydroflavonol-4-reductase isoform X1. (344 aa)
	LOC107803461	Casein kinase I-like isoform X1. (607 aa)
	LOC107804263	F-box protein SKIP14-like. (473 aa)
	LOC107804409	WD and tetratricopeptide repeats protein 1-like isoform X1. (762 aa)
	LOC107804781	F-box protein SKIP14-like. (503 aa)
	LOC107806158	E3 ubiquitin-protein ligase KEG-like. (1625 aa)
	LOC107808600	Zinc finger protein 4-like. (249 aa)
	LOC107809711	20 kDa chaperonin, chloroplastic-like; Belongs to the GroES chaperonin family. (249 aa)
	LOC107812060	RNA polymerase II C-terminal domain phosphatase-like 3. (1241 aa)
	LOC107813347	LOW QUALITY PROTEIN: uncharacterized protein LOC107813347. (726 aa)
	LOC107814683	E3 ubiquitin-protein ligase AIP2-like. (318 aa)
	LOC107814812	RNA polymerase II C-terminal domain phosphatase-like 3. (1236 aa)
	LOC107815563	E3 ubiquitin-protein ligase AIP2-like. (318 aa)
	LOC107819153	Protein FREE1-like. (537 aa)
	LOC107821653	Zinc finger protein 4-like. (248 aa)
	LOC107822109	20 kDa chaperonin, chloroplastic-like; Belongs to the GroES chaperonin family. (252 aa)
	LOC107822490	G-protein coupled receptor 1-like. (321 aa)
	Ntalpha	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like. (348 aa)
	WREBP-2	WREBP-2 protein. (371 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107760928	LOC107771557	A0A1S3X4C0	A0A1S3Y386	Putative dihydroflavonol-4-reductase isoform X1.	Putative dihydroflavonol-4-reductase.	0.901
LOC107760928	LOC107803068	A0A1S3X4C0	A0A1S4B004	Putative dihydroflavonol-4-reductase isoform X1.	Putative dihydroflavonol-4-reductase isoform X1.	0.900
LOC107761117	LOC107777234	A0A1S3X456	A0A1S3YL69	Geranylgeranyl transferase type-1 subunit beta-like.	Geranylgeranyl transferase type-1 subunit beta isoform X1.	0.541
LOC107761117	LOC107777651	A0A1S3X456	A0A1S3YLR7	Geranylgeranyl transferase type-1 subunit beta-like.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.445
LOC107761117	LOC107784135	A0A1S3X456	A0A1S3Z8K5	Geranylgeranyl transferase type-1 subunit beta-like.	Geranylgeranyl transferase type-1 subunit beta-like.	0.540
LOC107761117	LOC107798306	A0A1S3X456	A0A1S4AK11	Geranylgeranyl transferase type-1 subunit beta-like.	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.	0.990
LOC107761117	LOC107827532	A0A1S3X456	A0A1S4D9V4	Geranylgeranyl transferase type-1 subunit beta-like.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.445
LOC107761117	Ntalpha	A0A1S3X456	W0YJD4	Geranylgeranyl transferase type-1 subunit beta-like.	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	0.990
LOC107771519	WREBP-2	A0A1S3Y2F2	Q9ZQT8	Uncharacterized zinc finger protein At4g06634-like.	WREBP-2 protein.	0.543
LOC107771557	LOC107760928	A0A1S3Y386	A0A1S3X4C0	Putative dihydroflavonol-4-reductase.	Putative dihydroflavonol-4-reductase isoform X1.	0.901
LOC107771557	LOC107803068	A0A1S3Y386	A0A1S4B004	Putative dihydroflavonol-4-reductase.	Putative dihydroflavonol-4-reductase isoform X1.	0.901
LOC107772013	LOC107775515	A0A1S3Y427	A0A1S3YF09	Uncharacterized protein LOC107772013.	E3 ubiquitin-protein ligase KEG-like.	0.529
LOC107772013	LOC107775864	A0A1S3Y427	A0A1S3YG05	Uncharacterized protein LOC107772013.	THO complex subunit 6-like isoform X1.	0.414
LOC107772013	LOC107777567	A0A1S3Y427	A0A1S3YLZ2	Uncharacterized protein LOC107772013.	THO complex subunit 6-like.	0.414
LOC107772013	LOC107778432	A0A1S3Y427	A0A1S3YPX7	Uncharacterized protein LOC107772013.	Uncharacterized protein LOC107778432 isoform X1.	0.544
LOC107772013	LOC107791441	A0A1S3Y427	A0A1S3ZX36	Uncharacterized protein LOC107772013.	THO complex subunit 6-like.	0.414
LOC107772013	LOC107804409	A0A1S3Y427	A0A1S4B4S3	Uncharacterized protein LOC107772013.	WD and tetratricopeptide repeats protein 1-like isoform X1.	0.867
LOC107772013	LOC107806158	A0A1S3Y427	A0A1S4BA72	Uncharacterized protein LOC107772013.	E3 ubiquitin-protein ligase KEG-like.	0.529
LOC107772013	LOC107814683	A0A1S3Y427	A0A1S4C378	Uncharacterized protein LOC107772013.	E3 ubiquitin-protein ligase AIP2-like.	0.477
LOC107772013	LOC107815563	A0A1S3Y427	A0A1S4C6V3	Uncharacterized protein LOC107772013.	E3 ubiquitin-protein ligase AIP2-like.	0.477