STRINGSTRING
LOC107800068 LOC107800068 LOC107767661 LOC107767661 LOC107779488 LOC107779488 LOC107780548 LOC107780548 LOC107800111 LOC107800111 LOC107806349 LOC107806349 LOC107807152 LOC107807152 LOC107807876 LOC107807876 LOC107821583 LOC107821583
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107800068Probable methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (805 aa)
LOC107767661aspartate--tRNA ligase 2, cytoplasmic-like. (552 aa)
LOC107779488proline--tRNA ligase, chloroplastic/mitochondrial-like. (544 aa)
LOC107780548methionine--tRNA ligase, cytoplasmic-like; Belongs to the class-I aminoacyl-tRNA synthetase family. (352 aa)
LOC107800111aspartate--tRNA ligase 2, cytoplasmic-like. (541 aa)
LOC107806349methionine--tRNA ligase, cytoplasmic-like. (96 aa)
LOC107807152methionine--tRNA ligase, cytoplasmic-like; Belongs to the class-I aminoacyl-tRNA synthetase family. (500 aa)
LOC107807876proline--tRNA ligase, chloroplastic/mitochondrial-like. (544 aa)
LOC107821583Probable methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (806 aa)
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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