(15 nodes) DRM complex network (Nicotiana tabacum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107761084	Proline-rich receptor-like protein kinase PERK8 isoform X1. (333 aa)
	LOC107761272	Protein ALWAYS EARLY 3-like isoform X1. (1138 aa)
	LOC107766447	Transcription factor E2FC-like. (378 aa)
	LOC107769149	Uncharacterized protein LOC107769149. (545 aa)
	LOC107770785	Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. (345 aa)
	LOC107771183	Uncharacterized protein LOC107771183. (294 aa)
	LOC107781014	Uncharacterized protein LOC107781014. (294 aa)
	LOC107804732	Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. (345 aa)
	LOC107808192	Protein ALWAYS EARLY 3-like. (1137 aa)
	LOC107810296	Protein ALWAYS EARLY 3-like. (285 aa)
	LOC107810295	Protein ALWAYS EARLY 3-like. (80 aa)
	LOC107819196	Proline-rich receptor-like protein kinase PERK8 isoform X1. (332 aa)
	LOC107829605	Uncharacterized protein LOC107829605 isoform X1. (291 aa)
	LOC107781702	Transcription factor E2FC-like. (382 aa)
	LOC107788234	Uncharacterized protein LOC107788234 isoform X1. (545 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107761272	LOC107766447	A0A1S3X518	A0A1S3XL48	Protein ALWAYS EARLY 3-like isoform X1.	Transcription factor E2FC-like.	0.821
LOC107761272	LOC107770785	A0A1S3X518	A0A1S3Y0J8	Protein ALWAYS EARLY 3-like isoform X1.	Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.	0.883
LOC107761272	LOC107781702	A0A1S3X518	A0A1S3Z1A9	Protein ALWAYS EARLY 3-like isoform X1.	Transcription factor E2FC-like.	0.821
LOC107761272	LOC107804732	A0A1S3X518	A0A1S4B5T6	Protein ALWAYS EARLY 3-like isoform X1.	Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.	0.883
LOC107766447	LOC107761272	A0A1S3XL48	A0A1S3X518	Transcription factor E2FC-like.	Protein ALWAYS EARLY 3-like isoform X1.	0.821
LOC107766447	LOC107770785	A0A1S3XL48	A0A1S3Y0J8	Transcription factor E2FC-like.	Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.	0.977
LOC107766447	LOC107804732	A0A1S3XL48	A0A1S4B5T6	Transcription factor E2FC-like.	Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.	0.977
LOC107766447	LOC107808192	A0A1S3XL48	A0A1S4BH11	Transcription factor E2FC-like.	Protein ALWAYS EARLY 3-like.	0.821
LOC107766447	LOC107810295	A0A1S3XL48	A0A1S4BNW9	Transcription factor E2FC-like.	Protein ALWAYS EARLY 3-like.	0.821
LOC107766447	LOC107810296	A0A1S3XL48	A0A1S4BNS0	Transcription factor E2FC-like.	Protein ALWAYS EARLY 3-like.	0.821
LOC107769149	LOC107771183	A0A1S3XVE1	A0A1S3Y1J8	Uncharacterized protein LOC107769149.	Uncharacterized protein LOC107771183.	0.639
LOC107769149	LOC107781014	A0A1S3XVE1	A0A1S3YYG5	Uncharacterized protein LOC107769149.	Uncharacterized protein LOC107781014.	0.646
LOC107769149	LOC107829605	A0A1S3XVE1	A0A1S4DGQ0	Uncharacterized protein LOC107769149.	Uncharacterized protein LOC107829605 isoform X1.	0.584
LOC107770785	LOC107761272	A0A1S3Y0J8	A0A1S3X518	Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.	Protein ALWAYS EARLY 3-like isoform X1.	0.883
LOC107770785	LOC107766447	A0A1S3Y0J8	A0A1S3XL48	Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.	Transcription factor E2FC-like.	0.977
LOC107770785	LOC107781702	A0A1S3Y0J8	A0A1S3Z1A9	Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.	Transcription factor E2FC-like.	0.977
LOC107770785	LOC107808192	A0A1S3Y0J8	A0A1S4BH11	Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.	Protein ALWAYS EARLY 3-like.	0.883
LOC107770785	LOC107810295	A0A1S3Y0J8	A0A1S4BNW9	Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.	Protein ALWAYS EARLY 3-like.	0.883
LOC107770785	LOC107810296	A0A1S3Y0J8	A0A1S4BNS0	Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.	Protein ALWAYS EARLY 3-like.	0.883
LOC107771183	LOC107769149	A0A1S3Y1J8	A0A1S3XVE1	Uncharacterized protein LOC107771183.	Uncharacterized protein LOC107769149.	0.639