STRINGSTRING
LOC107767604 LOC107767604 LOC107767602 LOC107767602 LOC107771620 LOC107771620 LOC107771822 LOC107771822 LOC107792475 LOC107792475 LOC107806186 LOC107806186 LOC107813682 LOC107813682 LOC107818482 LOC107818482 LOC107819003 LOC107819003 LOC107819571 LOC107819571 LOC107819690 LOC107819690 LOC107825065 LOC107825065 LOC107825384 LOC107825384 LOC107827827 LOC107827827 LOC107832829 LOC107832829
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107767604Metacaspase-1-like. (336 aa)
LOC107767602Metacaspase-1-like. (129 aa)
LOC107771620Protein piccolo-like isoform X1. (493 aa)
LOC107771822Protein LOL1 isoform X1. (145 aa)
LOC107792475Protein LSD1-like. (170 aa)
LOC107806186Metacaspase-1-like. (337 aa)
LOC107813682Metacaspase-1-like. (245 aa)
LOC107818482Pollen-specific leucine-rich repeat extensin-like protein 2 isoform X1. (492 aa)
LOC107819003Protein LOL1-like. (124 aa)
LOC107819571Metacaspase-1-like. (375 aa)
LOC107819690Metacaspase-1. (364 aa)
LOC107825065Protein LOL2-like. (175 aa)
LOC107825384Protein LSD1-like. (143 aa)
LOC107827827Protein LOL2-like. (175 aa)
LOC107832829Metacaspase-1-like. (369 aa)
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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