STRINGSTRING
LOC107797613 LOC107797613 LOC107821068 LOC107821068 LOC107818035 LOC107818035 LOC107812739 LOC107812739 LOC107812326 LOC107812326 LOC107810129 LOC107810129 LOC107806158 LOC107806158 LOC107806137 LOC107806137 LOC107805440 LOC107805440 LOC107802983 LOC107802983 LOC107799045 LOC107799045 LOC107798121 LOC107798121 LOC107825256 LOC107825256 LOC107796633 LOC107796633 LOC107793194 LOC107793194 LOC107791756 LOC107791756 LOC107791759 LOC107791759 LOC107784870 LOC107784870 LOC107777864 LOC107777864 LOC107775515 LOC107775515 LOC107772885 LOC107772885 LOC107770570 LOC107770570 LOC107770092 LOC107770092 LOC107765326 LOC107765326 LOC107765323 LOC107765323 LOC107760559 LOC107760559 LOC107759713 LOC107759713 LOC107759346 LOC107759346 LOC107829980 LOC107829980
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107797613Uncharacterized protein LOC107797613. (267 aa)
LOC107821068E3 ubiquitin-protein ligase RNF170-like. (208 aa)
LOC107818035E3 ubiquitin-protein ligase ORTHRUS 2-like. (684 aa)
LOC107812739BRCA1-associated RING domain protein 1. (687 aa)
LOC107812326E3 ubiquitin-protein ligase RNF170-like. (263 aa)
LOC107810129E3 ubiquitin-protein ligase PRT1. (432 aa)
LOC107806158E3 ubiquitin-protein ligase KEG-like. (1625 aa)
LOC107806137E3 ubiquitin-protein ligase RNF170-like. (244 aa)
LOC107805440Protein RMD5 homolog A-like. (386 aa)
LOC107802983E3 ubiquitin-protein ligase SHPRH. (1304 aa)
LOC107799045E3 ubiquitin-protein ligase RNF182-like. (260 aa)
LOC107798121E3 ubiquitin-protein ligase RNF182-like. (261 aa)
LOC107825256E3 ubiquitin-protein ligase RMA1H1-like. (227 aa)
LOC107796633E3 ubiquitin-protein ligase RMA1H1-like. (238 aa)
LOC107793194E3 ubiquitin-protein ligase KEG-like isoform X1. (856 aa)
LOC107791756Probable E3 ubiquitin-protein ligase BAH1-like. (335 aa)
LOC107791759Uncharacterized protein LOC107791759. (860 aa)
LOC107784870E3 ubiquitin-protein ligase ORTHRUS 2-like. (686 aa)
LOC107777864Uncharacterized protein LOC107777864 isoform X1. (280 aa)
LOC107775515E3 ubiquitin-protein ligase KEG-like. (1618 aa)
LOC107772885E3 ubiquitin-protein ligase ORTHRUS 2-like. (539 aa)
LOC107770570Probable E3 ubiquitin-protein ligase BAH1-like. (335 aa)
LOC107770092Uncharacterized protein LOC107770092. (268 aa)
LOC107765326E3 ubiquitin-protein ligase RNF170-like isoform X1. (221 aa)
LOC107765323E3 ubiquitin-protein ligase PRT1-like. (350 aa)
LOC107760559E3 ubiquitin-protein ligase RNF182-like. (267 aa)
LOC107759713E3 ubiquitin-protein ligase SHPRH-like. (340 aa)
LOC107759346DNA repair protein RAD16-like. (916 aa)
LOC107829980Protein RMD5 homolog A-like. (386 aa)
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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