3 items (Nicotiana tabacum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107763959	Uncharacterized protein LOC107763959; Belongs to the bacterial ribosomal protein bS18 family. (269 aa)
	LOC107827312	Uncharacterized protein LOC107827312; Belongs to the bacterial ribosomal protein bS18 family. (269 aa)
	rps18	Ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family. (101 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107763959	LOC107827312	A0A1S3XDD9	A0A1S4D8X5	Uncharacterized protein LOC107763959; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein LOC107827312; Belongs to the bacterial ribosomal protein bS18 family.	0.543
LOC107763959	rps18	A0A1S3XDD9	A0A140G1T9	Uncharacterized protein LOC107763959; Belongs to the bacterial ribosomal protein bS18 family.	Ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family.	0.572
LOC107827312	LOC107763959	A0A1S4D8X5	A0A1S3XDD9	Uncharacterized protein LOC107827312; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein LOC107763959; Belongs to the bacterial ribosomal protein bS18 family.	0.543
LOC107827312	rps18	A0A1S4D8X5	A0A140G1T9	Uncharacterized protein LOC107827312; Belongs to the bacterial ribosomal protein bS18 family.	Ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family.	0.572
rps18	LOC107763959	A0A140G1T9	A0A1S3XDD9	Ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein LOC107763959; Belongs to the bacterial ribosomal protein bS18 family.	0.572
rps18	LOC107827312	A0A140G1T9	A0A1S4D8X5	Ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein LOC107827312; Belongs to the bacterial ribosomal protein bS18 family.	0.572