STRINGSTRING
LOC107832829 LOC107832829 LOC107825065 LOC107825065 LOC107825384 LOC107825384 LOC107806186 LOC107806186 LOC107813682 LOC107813682 LOC107818482 LOC107818482 LOC107819003 LOC107819003 LOC107819571 LOC107819571 LOC107827827 LOC107827827 LOC107767604 LOC107767604 LOC107771620 LOC107771620 LOC107792475 LOC107792475 LOC107771822 LOC107771822 LOC107819690 LOC107819690
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107832829Metacaspase-1-like. (369 aa)
LOC107825065Protein LOL2-like. (175 aa)
LOC107825384Protein LSD1-like. (143 aa)
LOC107806186Metacaspase-1-like. (337 aa)
LOC107813682Metacaspase-1-like. (245 aa)
LOC107818482Pollen-specific leucine-rich repeat extensin-like protein 2 isoform X1. (492 aa)
LOC107819003Protein LOL1-like. (124 aa)
LOC107819571Metacaspase-1-like. (375 aa)
LOC107827827Protein LOL2-like. (175 aa)
LOC107767604Metacaspase-1-like. (336 aa)
LOC107771620Protein piccolo-like isoform X1. (493 aa)
LOC107792475Protein LSD1-like. (170 aa)
LOC107771822Protein LOL1 isoform X1. (145 aa)
LOC107819690Metacaspase-1. (364 aa)
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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