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rps7 rps7 RPL8 RPL8 rpl2-2 rpl2-2 ccmFN ccmFN rps12-2 rps12-2 cox3 cox3 rps19 rps19 atp9 atp9 rpl16 rpl16 rps12 rps12 CcmB CcmB rps13 rps13 nad1 nad1 rpl16-2 rpl16-2 rps19-2 rps19-2 rpl2 rpl2 orf122 orf122 orf147 orf147 sdh3 sdh3 nad3 nad3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps7Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family. (155 aa)
RPL860S ribosomal protein L8. (260 aa)
rpl2-2Ribosomal protein L2. (331 aa)
ccmFNCytochrome c maturation protein CcmFN. (574 aa)
rps12-2Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (123 aa)
cox3Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex. (265 aa)
rps19Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (94 aa)
atp9ATP synthase subunit 9, mitochondrial; Belongs to the ATPase C chain family. (77 aa)
rpl16Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (171 aa)
rps12Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (125 aa)
CcmBCytochrome C maturation protein CcmB. (206 aa)
rps13Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family. (116 aa)
nad1NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family. (325 aa)
rpl16-2Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (134 aa)
rps19-2Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (92 aa)
rpl2Ribosomal protein L2. (274 aa)
orf122Uncharacterized protein. (122 aa)
orf147Uncharacterized mitochondrial protein AtMg00660-like. (147 aa)
sdh3Succinate dehydrogenase subunit 3. (108 aa)
nad3NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (118 aa)
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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