19 items (Nicotiana tabacum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Your Input:
	rps16	Ribosomal protein S16. (85 aa)
	atpF	ATP synthase CF0 B subunit; Belongs to the ATPase B chain family. (184 aa)
	RPL8	60S ribosomal protein L8. (260 aa)
	rpl2-2	Ribosomal protein L2. (331 aa)
	rps12-2	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (123 aa)
	rpl2	Ribosomal protein L2. (274 aa)
	ycf2	Protein Ycf2; Probable ATPase of unknown function. Its presence in a non- photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis; Belongs to the Ycf2 family. (2280 aa)
	ycf1	Protein TIC 214. (1902 aa)
	ndhH	NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (393 aa)
	ccsA	Cytochrome c biogenesis protein CcsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment. (313 aa)
	rpl16-2	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (134 aa)
	petB	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (215 aa)
	clpP	ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (196 aa)
	rpl20	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (128 aa)
	psbF	Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (39 aa)
	atpI	ATP synthase CF0 A subunit. (247 aa)
	rps12	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (125 aa)
	rpl16	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (171 aa)
	matK	Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily. (509 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPL8	atpF	P25998	A0A140G1P8	60S ribosomal protein L8.	ATP synthase CF0 B subunit; Belongs to the ATPase B chain family.	0.978
RPL8	atpI	P25998	A0A140G1Q0	60S ribosomal protein L8.	ATP synthase CF0 A subunit.	0.890
RPL8	ccsA	P25998	A0A140G1W8	60S ribosomal protein L8.	Cytochrome c biogenesis protein CcsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.	0.875
RPL8	clpP	P25998	A0A140G1U2	60S ribosomal protein L8.	ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.	0.833
RPL8	matK	P25998	A0A140G1P3	60S ribosomal protein L8.	Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily.	0.772
RPL8	ndhH	P25998	A0A140G1X5	60S ribosomal protein L8.	NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.	0.828
RPL8	petB	P25998	A0A140G1U7	60S ribosomal protein L8.	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	0.829
RPL8	psbF	P25998	A0A140G1T2	60S ribosomal protein L8.	Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family.	0.841
RPL8	rpl16	P25998	A0A0M3SGP4	60S ribosomal protein L8.	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.971
RPL8	rpl16-2	P25998	A0A140G1V4	60S ribosomal protein L8.	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.975
RPL8	rpl2-2	P25998	A0A1S4EUK8	60S ribosomal protein L8.	Ribosomal protein L2.	0.429
RPL8	rpl20	P25998	A0A140G1U0	60S ribosomal protein L8.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.987
RPL8	rps12	P25998	A0A0M4JAF4	60S ribosomal protein L8.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.970
RPL8	rps12-2	P25998	A0A140G1Y5	60S ribosomal protein L8.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.970
RPL8	rps16	P25998	A0A140G1P4	60S ribosomal protein L8.	Ribosomal protein S16.	0.972
RPL8	ycf1	P25998	A0A140G1X7	60S ribosomal protein L8.	Protein TIC 214.	0.805
RPL8	ycf2	P25998	A0A140G1Y2	60S ribosomal protein L8.	Protein Ycf2; Probable ATPase of unknown function. Its presence in a non- photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis; Belongs to the Ycf2 family.	0.772
atpF	RPL8	A0A140G1P8	P25998	ATP synthase CF0 B subunit; Belongs to the ATPase B chain family.	60S ribosomal protein L8.	0.978
atpF	atpI	A0A140G1P8	A0A140G1Q0	ATP synthase CF0 B subunit; Belongs to the ATPase B chain family.	ATP synthase CF0 A subunit.	0.999
atpF	ccsA	A0A140G1P8	A0A140G1W8	ATP synthase CF0 B subunit; Belongs to the ATPase B chain family.	Cytochrome c biogenesis protein CcsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.	0.918