10 items (Nicotiana tabacum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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gene fusions

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Your Input:
	petD	Cytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (160 aa)
	rpl16	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (171 aa)
	rps12	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (125 aa)
	rpoB	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1070 aa)
	petB	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (215 aa)
	rpl16-2	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (134 aa)
	ndhF	NADH dehydrogenase subunit 5; Belongs to the complex I subunit 5 family. (740 aa)
	rpl32	Ribosomal protein L32. (55 aa)
	ycf1	Protein TIC 214. (1902 aa)
	rps12-2	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (123 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ndhF	petB	A0A140G1W6	A0A140G1U7	NADH dehydrogenase subunit 5; Belongs to the complex I subunit 5 family.	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	0.980
ndhF	petD	A0A140G1W6	A0A140G1U8	NADH dehydrogenase subunit 5; Belongs to the complex I subunit 5 family.	Cytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	0.975
ndhF	rpl16	A0A140G1W6	A0A0M3SGP4	NADH dehydrogenase subunit 5; Belongs to the complex I subunit 5 family.	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.872
ndhF	rpl16-2	A0A140G1W6	A0A140G1V4	NADH dehydrogenase subunit 5; Belongs to the complex I subunit 5 family.	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.889
ndhF	rpl32	A0A140G1W6	A0A140G1W7	NADH dehydrogenase subunit 5; Belongs to the complex I subunit 5 family.	Ribosomal protein L32.	0.884
ndhF	rpoB	A0A140G1W6	A0A140G1Q4	NADH dehydrogenase subunit 5; Belongs to the complex I subunit 5 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.892
ndhF	rps12	A0A140G1W6	A0A0M4JAF4	NADH dehydrogenase subunit 5; Belongs to the complex I subunit 5 family.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.835
ndhF	rps12-2	A0A140G1W6	A0A140G1Y5	NADH dehydrogenase subunit 5; Belongs to the complex I subunit 5 family.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.886
ndhF	ycf1	A0A140G1W6	A0A140G1X7	NADH dehydrogenase subunit 5; Belongs to the complex I subunit 5 family.	Protein TIC 214.	0.893
petB	ndhF	A0A140G1U7	A0A140G1W6	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	NADH dehydrogenase subunit 5; Belongs to the complex I subunit 5 family.	0.980
petB	petD	A0A140G1U7	A0A140G1U8	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	Cytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	0.999
petB	rpl16	A0A140G1U7	A0A0M3SGP4	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.913
petB	rpl16-2	A0A140G1U7	A0A140G1V4	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.919
petB	rpl32	A0A140G1U7	A0A140G1W7	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	Ribosomal protein L32.	0.809
petB	rpoB	A0A140G1U7	A0A140G1Q4	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.909
petB	rps12	A0A140G1U7	A0A0M4JAF4	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.867
petB	rps12-2	A0A140G1U7	A0A140G1Y5	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.868
petB	ycf1	A0A140G1U7	A0A140G1X7	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	Protein TIC 214.	0.872
petD	ndhF	A0A140G1U8	A0A140G1W6	Cytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	NADH dehydrogenase subunit 5; Belongs to the complex I subunit 5 family.	0.975
petD	petB	A0A140G1U8	A0A140G1U7	Cytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.	0.999