(27 nodes) (2022) When Poly(A) Binding Proteins Meet Viral Infections, Including SARS-CoV-2. network (Nicotiana tabacum)

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Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	LOC107763322	RNA helicase. (594 aa)
	ERF3	Ethylene-responsive transcription factor 3; Transcription factor that binds to the GCC-box pathogenesis- related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity); Belongs to the ethylene-response factor family. Class 2 subfamily. (225 aa)
	eIF4E	Eukaryotic translation initiation factor 4E-1-like; Belongs to the eukaryotic initiation factor 4E family. (222 aa)
	ERF4	Ethylene-responsive transcription factor 4; Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl- jasmonate. May regulate other AtERFs (By similarity). Belongs to the ethylene-response factor family. Class 2 subfamily. (225 aa)
	POLX_TOBAC	Retrovirus-related Pol polyprotein from transposon TNT 1-94. (1328 aa)
	PABP	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (657 aa)
	LOC107831076	RNA helicase. (747 aa)
	LOC107831279	RNA helicase. (600 aa)
	LOC107830216	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (649 aa)
	LOC107814429	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (662 aa)
	LOC107809091	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (657 aa)
	LOC107807539	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (663 aa)
	LOC107806417	RNA helicase. (566 aa)
	LOC107802514	RNA helicase. (592 aa)
	LOC107794494	RNA helicase. (566 aa)
	LOC107791554	Uncharacterized protein LOC107791554. (252 aa)
	LOC107791147	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (615 aa)
	LOC107790428	RNA helicase. (598 aa)
	LOC107788613	RNA helicase. (746 aa)
	LOC107788342	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (626 aa)
	LOC107780004	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (657 aa)
	LOC107779957	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (567 aa)
	LOC107778042	Ethylene-responsive transcription factor 4. (225 aa)
	LOC107829212	Eukaryotic translation initiation factor 4E-1-like; Belongs to the eukaryotic initiation factor 4E family. (222 aa)
	LOC107761991	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
	LOC107759865	Uncharacterized protein LOC107759865. (252 aa)
	LOC107759676	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (630 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERF3	LOC107759676	Q9SXS8	A0A1S3WZU0	Ethylene-responsive transcription factor 3; Transcription factor that binds to the GCC-box pathogenesis- related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity); Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.600
ERF3	LOC107761991	Q9SXS8	A0A1S3X7C1	Ethylene-responsive transcription factor 3; Transcription factor that binds to the GCC-box pathogenesis- related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity); Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.600
ERF3	LOC107779957	Q9SXS8	A0A1S3YUK1	Ethylene-responsive transcription factor 3; Transcription factor that binds to the GCC-box pathogenesis- related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity); Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.600
ERF3	LOC107780004	Q9SXS8	A0A1S3YV27	Ethylene-responsive transcription factor 3; Transcription factor that binds to the GCC-box pathogenesis- related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity); Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.600
ERF3	LOC107788342	Q9SXS8	A0A1S3ZLU2	Ethylene-responsive transcription factor 3; Transcription factor that binds to the GCC-box pathogenesis- related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity); Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.600
ERF3	LOC107791147	Q9SXS8	A0A1S3ZW44	Ethylene-responsive transcription factor 3; Transcription factor that binds to the GCC-box pathogenesis- related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity); Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.600
ERF3	LOC107807539	Q9SXS8	A0A1S4BES8	Ethylene-responsive transcription factor 3; Transcription factor that binds to the GCC-box pathogenesis- related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity); Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.600
ERF3	LOC107809091	Q9SXS8	A0A1S4BJZ8	Ethylene-responsive transcription factor 3; Transcription factor that binds to the GCC-box pathogenesis- related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity); Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.600
ERF3	LOC107814429	Q9SXS8	A0A1S4C2F8	Ethylene-responsive transcription factor 3; Transcription factor that binds to the GCC-box pathogenesis- related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity); Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.600
ERF3	LOC107830216	Q9SXS8	A0A1S4DIS8	Ethylene-responsive transcription factor 3; Transcription factor that binds to the GCC-box pathogenesis- related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity); Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.600
ERF3	PABP	Q9SXS8	I2FJN7	Ethylene-responsive transcription factor 3; Transcription factor that binds to the GCC-box pathogenesis- related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity); Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.529
ERF4	LOC107759676	Q40477	A0A1S3WZU0	Ethylene-responsive transcription factor 4; Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl- jasmonate. May regulate other AtERFs (By similarity). Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.622
ERF4	LOC107761991	Q40477	A0A1S3X7C1	Ethylene-responsive transcription factor 4; Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl- jasmonate. May regulate other AtERFs (By similarity). Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.622
ERF4	LOC107779957	Q40477	A0A1S3YUK1	Ethylene-responsive transcription factor 4; Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl- jasmonate. May regulate other AtERFs (By similarity). Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.622
ERF4	LOC107780004	Q40477	A0A1S3YV27	Ethylene-responsive transcription factor 4; Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl- jasmonate. May regulate other AtERFs (By similarity). Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.622
ERF4	LOC107788342	Q40477	A0A1S3ZLU2	Ethylene-responsive transcription factor 4; Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl- jasmonate. May regulate other AtERFs (By similarity). Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.622
ERF4	LOC107791147	Q40477	A0A1S3ZW44	Ethylene-responsive transcription factor 4; Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl- jasmonate. May regulate other AtERFs (By similarity). Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.622
ERF4	LOC107807539	Q40477	A0A1S4BES8	Ethylene-responsive transcription factor 4; Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl- jasmonate. May regulate other AtERFs (By similarity). Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.622
ERF4	LOC107809091	Q40477	A0A1S4BJZ8	Ethylene-responsive transcription factor 4; Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl- jasmonate. May regulate other AtERFs (By similarity). Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.622
ERF4	LOC107814429	Q40477	A0A1S4C2F8	Ethylene-responsive transcription factor 4; Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl- jasmonate. May regulate other AtERFs (By similarity). Belongs to the ethylene-response factor family. Class 2 subfamily.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.622