16 items (Nicotiana tabacum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nad4	NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (495 aa)
	rpl2-2	Ribosomal protein L2. (331 aa)
	RPL8	60S ribosomal protein L8. (260 aa)
	cox3	Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex. (265 aa)
	atp9	ATP synthase subunit 9, mitochondrial; Belongs to the ATPase C chain family. (77 aa)
	rpl16	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (171 aa)
	rps12	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (125 aa)
	atp6	ATP synthase subunit a. (395 aa)
	atp4	Uncharacterized protein. (198 aa)
	cox2	Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. (260 aa)
	nad1	NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family. (325 aa)
	rps8	Ribosomal protein S8; Belongs to the universal ribosomal protein uS8 family. (134 aa)
	rpl16-2	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (134 aa)
	rpl2	Ribosomal protein L2. (274 aa)
	rps12-2	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (123 aa)
	nad2	NADH dehydrogenase subunit 2. (488 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPL8	atp4	P25998	A0A0M4JST5	60S ribosomal protein L8.	Uncharacterized protein.	0.784
RPL8	atp6	P25998	A0A0M4JB70	60S ribosomal protein L8.	ATP synthase subunit a.	0.868
RPL8	atp9	P25998	A0A0M3SGP0	60S ribosomal protein L8.	ATP synthase subunit 9, mitochondrial; Belongs to the ATPase C chain family.	0.894
RPL8	cox2	P25998	A0A0M5KC92	60S ribosomal protein L8.	Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.	0.743
RPL8	cox3	P25998	A0A0M3SGN3	60S ribosomal protein L8.	Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.	0.701
RPL8	nad1	P25998	A0A0M5KJL4	60S ribosomal protein L8.	NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family.	0.791
RPL8	nad2	P25998	A0A172CKR7	60S ribosomal protein L8.	NADH dehydrogenase subunit 2.	0.695
RPL8	nad4	P25998	A0A1S4EUE0	60S ribosomal protein L8.	NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.771
RPL8	rpl16	P25998	A0A0M3SGP4	60S ribosomal protein L8.	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.971
RPL8	rpl16-2	P25998	A0A140G1V4	60S ribosomal protein L8.	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.975
RPL8	rpl2-2	P25998	A0A1S4EUK8	60S ribosomal protein L8.	Ribosomal protein L2.	0.429
RPL8	rps12	P25998	A0A0M4JAF4	60S ribosomal protein L8.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.970
RPL8	rps12-2	P25998	A0A140G1Y5	60S ribosomal protein L8.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.970
RPL8	rps8	P25998	A0A140G1V2	60S ribosomal protein L8.	Ribosomal protein S8; Belongs to the universal ribosomal protein uS8 family.	0.973
atp4	RPL8	A0A0M4JST5	P25998	Uncharacterized protein.	60S ribosomal protein L8.	0.784
atp4	atp6	A0A0M4JST5	A0A0M4JB70	Uncharacterized protein.	ATP synthase subunit a.	0.947
atp4	atp9	A0A0M4JST5	A0A0M3SGP0	Uncharacterized protein.	ATP synthase subunit 9, mitochondrial; Belongs to the ATPase C chain family.	0.979
atp4	cox2	A0A0M4JST5	A0A0M5KC92	Uncharacterized protein.	Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.	0.869
atp4	cox3	A0A0M4JST5	A0A0M3SGN3	Uncharacterized protein.	Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.	0.753
atp4	nad1	A0A0M4JST5	A0A0M5KJL4	Uncharacterized protein.	NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family.	0.899