(59 nodes) Glycine rich nucleic binding domain network (Nicotiana tabacum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107808070	G patch domain-containing protein TGH. (1006 aa)
	LOC107830786	Zinc finger CCCH domain-containing protein 18-like. (456 aa)
	LOC107829936	Uncharacterized protein LOC107829936 isoform X1. (481 aa)
	LOC107829218	Uncharacterized protein LOC107829218. (367 aa)
	LOC107828966	G patch domain-containing protein 8-like. (301 aa)
	LOC107828292	Septin and tuftelin-interacting protein 1 homolog 1-like. (305 aa)
	LOC107828399	Uncharacterized protein LOC107828399. (831 aa)
	LOC107827208	Uncharacterized protein LOC107827208. (857 aa)
	LOC107827146	Uncharacterized protein LOC107827146. (1074 aa)
	LOC107825451	Uncharacterized protein LOC107825451. (601 aa)
	LOC107823696	SUPPRESSOR OF ABI3-5-like. (329 aa)
	LOC107823007	Uncharacterized protein LOC107823007. (787 aa)
	LOC107822888	Uncharacterized protein LOC107822888. (421 aa)
	LOC107822326	Uncharacterized protein LOC107822326. (632 aa)
	LOC107819390	Endogenous retrovirus group K member 113 Pro protein-like. (163 aa)
	LOC107819375	Protein MOS2-like. (482 aa)
	LOC107818094	G patch domain-containing protein 8-like. (301 aa)
	LOC107817618	G patch domain-containing protein 11-like. (249 aa)
	LOC107817111	G patch domain-containing protein 11-like. (282 aa)
	LOC107815216	Uncharacterized protein LOC107815216 isoform X1. (481 aa)
	LOC107813967	DNA-damage-repair/toleration protein DRT111, chloroplastic-like. (388 aa)
	LOC107811560	Septin and tuftelin-interacting protein 1 homolog 1-like. (690 aa)
	LOC107811583	Uncharacterized protein LOC107811583. (708 aa)
	LOC107810146	Endogenous retrovirus group K member 113 Pro protein-like. (122 aa)
	LOC107807613	Uncharacterized protein LOC107807613. (685 aa)
	LOC107803751	Zinc finger CCCH domain-containing protein 18. (496 aa)
	LOC107803507	Uncharacterized protein LOC107803507. (682 aa)
	LOC107802710	Uncharacterized protein LOC107802710. (683 aa)
	LOC107801765	Uncharacterized protein LOC107801765. (786 aa)
	LOC107800379	Uncharacterized protein LOC107800379. (195 aa)
	LOC107799652	G patch domain and ankyrin repeat-containing protein 1 homolog. (149 aa)
	LOC107799357	Uncharacterized protein LOC107799357. (262 aa)
	LOC107798261	Uncharacterized protein LOC107798261. (137 aa)
	LOC107797792	Uncharacterized protein LOC107797792. (620 aa)
	LOC107797798	Uncharacterized protein LOC107797798. (541 aa)
	LOC107767697	Uncharacterized protein LOC107767697. (695 aa)
	LOC107767021	Uncharacterized protein LOC107767021. (630 aa)
	LOC107763836	Uncharacterized protein LOC107763836. (570 aa)
	LOC107762657	Uncharacterized protein LOC107762657. (1116 aa)
	LOC107760997	Uncharacterized protein LOC107760997. (664 aa)
	LOC107778168	Uncharacterized protein LOC107778168. (1616 aa)
	LOC107779923	SUPPRESSOR OF ABI3-5. (1006 aa)
	LOC107780695	Uncharacterized protein LOC107780695. (902 aa)
	LOC107780693	DNA-damage-repair/toleration protein DRT111, chloroplastic-like. (386 aa)
	LOC107785180	Uncharacterized protein LOC107785180. (939 aa)
	LOC107788557	Uncharacterized protein LOC107788557. (539 aa)
	LOC107788951	G-patch domain-containing protein C1486.03-like. (149 aa)
	LOC107796074	Uncharacterized protein LOC107796074. (571 aa)
	LOC107789035	G patch domain-containing protein TGH-like. (960 aa)
	LOC107790588	Uncharacterized protein LOC107790588. (749 aa)
	LOC107791223	G patch domain-containing protein 11-like. (149 aa)
	LOC107791790	Protein MOS2-like. (475 aa)
	LOC107795990	LOW QUALITY PROTEIN: uncharacterized protein LOC107795990. (1648 aa)
	LOC107768855	Uncharacterized protein LOC107768855. (596 aa)
	LOC107771083	Uncharacterized protein LOC107771083. (903 aa)
	LOC107774486	Uncharacterized protein LOC107774486. (682 aa)
	LOC107774744	Uncharacterized protein LOC107774744. (366 aa)
	LOC107775837	SURP and G-patch domain-containing protein 1-like protein. (344 aa)
	LOC107830808	LOW QUALITY PROTEIN: septin and tuftelin-interacting protein 1 homolog 1-like. (567 aa)

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107774744	LOC107779923	A0A1S3YCK7	A0A1S3YVC0	Uncharacterized protein LOC107774744.	SUPPRESSOR OF ABI3-5.	0.821
LOC107774744	LOC107788951	A0A1S3YCK7	A0A1S3ZPK4	Uncharacterized protein LOC107774744.	G-patch domain-containing protein C1486.03-like.	0.821
LOC107774744	LOC107791223	A0A1S3YCK7	A0A1S3ZWK4	Uncharacterized protein LOC107774744.	G patch domain-containing protein 11-like.	0.821
LOC107774744	LOC107799652	A0A1S3YCK7	A0A1S4AP78	Uncharacterized protein LOC107774744.	G patch domain and ankyrin repeat-containing protein 1 homolog.	0.821
LOC107774744	LOC107817111	A0A1S3YCK7	A0A1S4CB74	Uncharacterized protein LOC107774744.	G patch domain-containing protein 11-like.	0.515
LOC107774744	LOC107817618	A0A1S3YCK7	A0A1S4CCT9	Uncharacterized protein LOC107774744.	G patch domain-containing protein 11-like.	0.515
LOC107774744	LOC107823696	A0A1S3YCK7	A0A1S4CXX5	Uncharacterized protein LOC107774744.	SUPPRESSOR OF ABI3-5-like.	0.821
LOC107775837	LOC107779923	A0A1S3YFR2	A0A1S3YVC0	SURP and G-patch domain-containing protein 1-like protein.	SUPPRESSOR OF ABI3-5.	0.479
LOC107775837	LOC107780693	A0A1S3YFR2	A0A1S3YX78	SURP and G-patch domain-containing protein 1-like protein.	DNA-damage-repair/toleration protein DRT111, chloroplastic-like.	0.848
LOC107775837	LOC107788951	A0A1S3YFR2	A0A1S3ZPK4	SURP and G-patch domain-containing protein 1-like protein.	G-patch domain-containing protein C1486.03-like.	0.479
LOC107775837	LOC107789035	A0A1S3YFR2	A0A1S3ZPK6	SURP and G-patch domain-containing protein 1-like protein.	G patch domain-containing protein TGH-like.	0.448
LOC107775837	LOC107791223	A0A1S3YFR2	A0A1S3ZWK4	SURP and G-patch domain-containing protein 1-like protein.	G patch domain-containing protein 11-like.	0.479
LOC107775837	LOC107799652	A0A1S3YFR2	A0A1S4AP78	SURP and G-patch domain-containing protein 1-like protein.	G patch domain and ankyrin repeat-containing protein 1 homolog.	0.479
LOC107775837	LOC107808070	A0A1S3YFR2	A0A1S4BGP8	SURP and G-patch domain-containing protein 1-like protein.	G patch domain-containing protein TGH.	0.448
LOC107775837	LOC107813967	A0A1S3YFR2	A0A1S4C155	SURP and G-patch domain-containing protein 1-like protein.	DNA-damage-repair/toleration protein DRT111, chloroplastic-like.	0.848
LOC107775837	LOC107823696	A0A1S3YFR2	A0A1S4CXX5	SURP and G-patch domain-containing protein 1-like protein.	SUPPRESSOR OF ABI3-5-like.	0.479
LOC107779923	LOC107774744	A0A1S3YVC0	A0A1S3YCK7	SUPPRESSOR OF ABI3-5.	Uncharacterized protein LOC107774744.	0.821
LOC107779923	LOC107775837	A0A1S3YVC0	A0A1S3YFR2	SUPPRESSOR OF ABI3-5.	SURP and G-patch domain-containing protein 1-like protein.	0.479
LOC107779923	LOC107780693	A0A1S3YVC0	A0A1S3YX78	SUPPRESSOR OF ABI3-5.	DNA-damage-repair/toleration protein DRT111, chloroplastic-like.	0.598
LOC107779923	LOC107791790	A0A1S3YVC0	A0A1S3ZYI4	SUPPRESSOR OF ABI3-5.	Protein MOS2-like.	0.562