(40 nodes) Potassium channel domain, and Detection of calcium ion network (Periophthalmus magnuspinnatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMGP00000000465	Uncharacterized protein. (239 aa)
	ENSPMGP00000001837	Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a. (1185 aa)
	KCNK12	Potassium two pore domain channel subfamily K member 12; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (408 aa)
	ENSPMGP00000002279	Potassium channel, subfamily K, member 2a; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (418 aa)
	ENSPMGP00000002913	Potassium channel subfamily K member. (337 aa)
	ENSPMGP00000003253	Potassium channel subfamily K member. (385 aa)
	ENSPMGP00000004478	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (303 aa)
	ENSPMGP00000005505	Potassium channel, subfamily T, member 1. (1107 aa)
	ENSPMGP00000005713	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (438 aa)
	ENSPMGP00000005753	Potassium channel, subfamily K, member 4a; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (533 aa)
	KCNK16	Potassium two pore domain channel subfamily K member 16; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (287 aa)
	ENSPMGP00000007406	Potassium channel, subfamily K, member 17; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (290 aa)
	ENSPMGP00000007413	Potassium channel, subfamily K, member 5a; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (522 aa)
	KCNN2	Potassium calcium-activated channel subfamily N member 2. (666 aa)
	ENSPMGP00000009186	Potassium channel subfamily K member. (395 aa)
	ENSPMGP00000009258	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3. (768 aa)
	ENSPMGP00000011274	Si:ch211-38m6.7. (245 aa)
	ENSPMGP00000011276	Potassium large conductance calcium-activated channel, subfamily M, beta member 2. (230 aa)
	ENSPMGP00000012165	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (407 aa)
	ENSPMGP00000012454	Uncharacterized protein. (458 aa)
	ENSPMGP00000013194	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (353 aa)
	KCNK4	Potassium two pore domain channel subfamily K member 4; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (515 aa)
	ENSPMGP00000014275	CaMBD domain-containing protein. (263 aa)
	ENSPMGP00000015839	Si:dkey-21e5.1. (1025 aa)
	ENSPMGP00000015953	Potassium channel, subfamily K, member 10a; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (511 aa)
	ENSPMGP00000017648	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a. (551 aa)
	ENSPMGP00000018813	Potassium channel, subfamily K, member 10b; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (551 aa)
	KCNMB4	Potassium calcium-activated channel subfamily M regulatory beta subunit 4. (258 aa)
	ENSPMGP00000021059	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (423 aa)
	ENSPMGP00000021125	Potassium channel subfamily K member. (346 aa)
	ENSPMGP00000024128	Potassium channel, subfamily K, member 18; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (401 aa)
	ENSPMGP00000024471	Potassium channel subfamily K member. (318 aa)
	ENSPMGP00000024740	BK_channel_a domain-containing protein. (159 aa)
	ENSPMGP00000025489	Potassium channel, subfamily K, member 13b; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (416 aa)
	ENSPMGP00000025952	Potassium channel subfamily K member. (380 aa)
	ENSPMGP00000026101	Uncharacterized protein. (176 aa)
	ENSPMGP00000028877	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (400 aa)
	ENSPMGP00000028961	Potassium inwardly-rectifying channel, subfamily J, member 13. (351 aa)
	ENSPMGP00000029324	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4. (286 aa)
	ENSPMGP00000029401	CaMBD domain-containing protein. (525 aa)

Your Current Organism:

Periophthalmus magnuspinnatus

NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMGP00000000465	ENSPMGP00000001837	ENSPMGP00000000465	ENSPMGP00000001837	Uncharacterized protein.	Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.	0.686
ENSPMGP00000000465	ENSPMGP00000005505	ENSPMGP00000000465	ENSPMGP00000005505	Uncharacterized protein.	Potassium channel, subfamily T, member 1.	0.630
ENSPMGP00000000465	ENSPMGP00000009258	ENSPMGP00000000465	ENSPMGP00000009258	Uncharacterized protein.	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3.	0.623
ENSPMGP00000000465	ENSPMGP00000011274	ENSPMGP00000000465	ENSPMGP00000011274	Uncharacterized protein.	Si:ch211-38m6.7.	0.813
ENSPMGP00000000465	ENSPMGP00000012454	ENSPMGP00000000465	ENSPMGP00000012454	Uncharacterized protein.	Uncharacterized protein.	0.686
ENSPMGP00000000465	ENSPMGP00000014275	ENSPMGP00000000465	ENSPMGP00000014275	Uncharacterized protein.	CaMBD domain-containing protein.	0.622
ENSPMGP00000000465	ENSPMGP00000015839	ENSPMGP00000000465	ENSPMGP00000015839	Uncharacterized protein.	Si:dkey-21e5.1.	0.630
ENSPMGP00000000465	ENSPMGP00000017648	ENSPMGP00000000465	ENSPMGP00000017648	Uncharacterized protein.	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a.	0.638
ENSPMGP00000000465	ENSPMGP00000024740	ENSPMGP00000000465	ENSPMGP00000024740	Uncharacterized protein.	BK_channel_a domain-containing protein.	0.686
ENSPMGP00000000465	ENSPMGP00000026101	ENSPMGP00000000465	ENSPMGP00000026101	Uncharacterized protein.	Uncharacterized protein.	0.686
ENSPMGP00000000465	ENSPMGP00000029324	ENSPMGP00000000465	ENSPMGP00000029324	Uncharacterized protein.	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.	0.824
ENSPMGP00000000465	ENSPMGP00000029401	ENSPMGP00000000465	ENSPMGP00000029401	Uncharacterized protein.	CaMBD domain-containing protein.	0.577
ENSPMGP00000000465	KCNMB4	ENSPMGP00000000465	ENSPMGP00000020475	Uncharacterized protein.	Potassium calcium-activated channel subfamily M regulatory beta subunit 4.	0.820
ENSPMGP00000000465	KCNN2	ENSPMGP00000000465	ENSPMGP00000008285	Uncharacterized protein.	Potassium calcium-activated channel subfamily N member 2.	0.623
ENSPMGP00000001837	ENSPMGP00000000465	ENSPMGP00000001837	ENSPMGP00000000465	Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.	Uncharacterized protein.	0.686
ENSPMGP00000001837	ENSPMGP00000009258	ENSPMGP00000001837	ENSPMGP00000009258	Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3.	0.609
ENSPMGP00000001837	ENSPMGP00000011274	ENSPMGP00000001837	ENSPMGP00000011274	Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.	Si:ch211-38m6.7.	0.834
ENSPMGP00000001837	ENSPMGP00000011276	ENSPMGP00000001837	ENSPMGP00000011276	Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.	Potassium large conductance calcium-activated channel, subfamily M, beta member 2.	0.686
ENSPMGP00000001837	ENSPMGP00000014275	ENSPMGP00000001837	ENSPMGP00000014275	Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.	CaMBD domain-containing protein.	0.609
ENSPMGP00000001837	ENSPMGP00000017648	ENSPMGP00000001837	ENSPMGP00000017648	Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a.	0.609