(28 nodes) Autophagosome membrane network (Periophthalmus magnuspinnatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMGP00000015048	Microtubule-associated protein 1 light chain 3 alpha. (121 aa)
	ENSPMGP00000015015	Microtubule-associated protein 1 light chain 3 gamma. (167 aa)
	ENSPMGP00000021842	Microtubule-associated protein 1 light chain 3 beta. (126 aa)
	ENSPMGP00000021975	Lysosomal associated membrane protein 1a. (415 aa)
	ENSPMGP00000022363	Zgc:92606. (116 aa)
	ENSPMGP00000022372	Microtubule-associated protein 1 light chain 3 gamma, like. (123 aa)
	RAB7A	RAB7A, member RAS oncogene family. (206 aa)
	ENSPMGP00000025852	Syntaxin 17. (301 aa)
	ENSPMGP00000025899	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (619 aa)
	GABARAPL2	GABA type A receptor associated protein like 2. (125 aa)
	ENSPMGP00000027701	GABA(A) receptor-associated protein b. (161 aa)
	ENSPMGP00000005679	ATG16 autophagy related 16-like 1 (S. cerevisiae). (561 aa)
	ENSPMGP00000014456	Zgc:123244. (239 aa)
	ENSPMGP00000018455	RAB7a, member RAS oncogene family. (135 aa)
	ENSPMGP00000016117	Synaptosome associated protein 29. (262 aa)
	ENSPMGP00000016032	RB1-inducible coiled-coil 1. (1573 aa)
	ENSPMGP00000018915	Uncharacterized protein. (399 aa)
	ENSPMGP00000020163	Lysosomal-associated membrane protein 2. (293 aa)
	JMY	Junction mediating and regulatory protein, p53 cofactor. (867 aa)
	ENSPMGP00000006333	Testis expressed 264, ER-phagy receptor a. (328 aa)
	ENSPMGP00000012224	Uncharacterized protein. (362 aa)
	ENSPMGP00000012269	ATPase H+ transporting accessory protein 2. (372 aa)
	ENSPMGP00000014122	WD_REPEATS_REGION domain-containing protein. (558 aa)
	TMEM74	Transmembrane protein 74. (286 aa)
	ENSPMGP00000003426	Tectonin beta-propeller repeat containing 1a. (405 aa)
	ENSPMGP00000003589	UV radiation resistance associated gene. (704 aa)
	ENSPMGP00000004610	SKICH domain-containing protein. (169 aa)
	ENSPMGP00000005298	Transmembrane protein 173. (410 aa)

Your Current Organism:

Periophthalmus magnuspinnatus

NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMGP00000003589	ENSPMGP00000005679	ENSPMGP00000003589	ENSPMGP00000005679	UV radiation resistance associated gene.	ATG16 autophagy related 16-like 1 (S. cerevisiae).	0.534
ENSPMGP00000003589	ENSPMGP00000014122	ENSPMGP00000003589	ENSPMGP00000014122	UV radiation resistance associated gene.	WD_REPEATS_REGION domain-containing protein.	0.556
ENSPMGP00000003589	ENSPMGP00000015015	ENSPMGP00000003589	ENSPMGP00000015015	UV radiation resistance associated gene.	Microtubule-associated protein 1 light chain 3 gamma.	0.667
ENSPMGP00000003589	ENSPMGP00000015048	ENSPMGP00000003589	ENSPMGP00000015048	UV radiation resistance associated gene.	Microtubule-associated protein 1 light chain 3 alpha.	0.705
ENSPMGP00000003589	ENSPMGP00000016032	ENSPMGP00000003589	ENSPMGP00000016032	UV radiation resistance associated gene.	RB1-inducible coiled-coil 1.	0.545
ENSPMGP00000003589	ENSPMGP00000016117	ENSPMGP00000003589	ENSPMGP00000016117	UV radiation resistance associated gene.	Synaptosome associated protein 29.	0.493
ENSPMGP00000003589	ENSPMGP00000021842	ENSPMGP00000003589	ENSPMGP00000021842	UV radiation resistance associated gene.	Microtubule-associated protein 1 light chain 3 beta.	0.705
ENSPMGP00000003589	ENSPMGP00000022363	ENSPMGP00000003589	ENSPMGP00000022363	UV radiation resistance associated gene.	Zgc:92606.	0.663
ENSPMGP00000003589	ENSPMGP00000022372	ENSPMGP00000003589	ENSPMGP00000022372	UV radiation resistance associated gene.	Microtubule-associated protein 1 light chain 3 gamma, like.	0.663
ENSPMGP00000003589	ENSPMGP00000025852	ENSPMGP00000003589	ENSPMGP00000025852	UV radiation resistance associated gene.	Syntaxin 17.	0.614
ENSPMGP00000003589	ENSPMGP00000027701	ENSPMGP00000003589	ENSPMGP00000027701	UV radiation resistance associated gene.	GABA(A) receptor-associated protein b.	0.786
ENSPMGP00000003589	GABARAPL2	ENSPMGP00000003589	ENSPMGP00000027417	UV radiation resistance associated gene.	GABA type A receptor associated protein like 2.	0.786
ENSPMGP00000004610	ENSPMGP00000005679	ENSPMGP00000004610	ENSPMGP00000005679	SKICH domain-containing protein.	ATG16 autophagy related 16-like 1 (S. cerevisiae).	0.453
ENSPMGP00000004610	ENSPMGP00000015015	ENSPMGP00000004610	ENSPMGP00000015015	SKICH domain-containing protein.	Microtubule-associated protein 1 light chain 3 gamma.	0.964
ENSPMGP00000004610	ENSPMGP00000015048	ENSPMGP00000004610	ENSPMGP00000015048	SKICH domain-containing protein.	Microtubule-associated protein 1 light chain 3 alpha.	0.679
ENSPMGP00000004610	ENSPMGP00000016032	ENSPMGP00000004610	ENSPMGP00000016032	SKICH domain-containing protein.	RB1-inducible coiled-coil 1.	0.957
ENSPMGP00000004610	ENSPMGP00000021842	ENSPMGP00000004610	ENSPMGP00000021842	SKICH domain-containing protein.	Microtubule-associated protein 1 light chain 3 beta.	0.679
ENSPMGP00000004610	ENSPMGP00000022363	ENSPMGP00000004610	ENSPMGP00000022363	SKICH domain-containing protein.	Zgc:92606.	0.882
ENSPMGP00000004610	ENSPMGP00000022372	ENSPMGP00000004610	ENSPMGP00000022372	SKICH domain-containing protein.	Microtubule-associated protein 1 light chain 3 gamma, like.	0.454
ENSPMGP00000004610	ENSPMGP00000027701	ENSPMGP00000004610	ENSPMGP00000027701	SKICH domain-containing protein.	GABA(A) receptor-associated protein b.	0.920