74 items (Periophthalmus magnuspinnatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMGP00000000039	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (506 aa)
	ENSPMGP00000000185	TAF4 domain-containing protein. (276 aa)
	ENSPMGP00000000804	General transcription factor IIA, 1. (377 aa)
	ENSPMGP00000001473	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (152 aa)
	ENSPMGP00000001668	TATA box binding protein. (289 aa)
	ENSPMGP00000002085	General transcription factor IIA, 1-like. (304 aa)
	ENSPMGP00000002307	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (423 aa)
	ENSPMGP00000002864	Upstream binding transcription factor, like. (619 aa)
	ENSPMGP00000003161	TBP-binding domain-containing protein. (401 aa)
	ENSPMGP00000003491	RRN3 homolog, RNA polymerase I transcription factor. (595 aa)
	ENSPMGP00000003695	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (623 aa)
	ENSPMGP00000004832	TATA box binding protein like 2. (234 aa)
	ENSPMGP00000005067	TAF domain-containing protein. (66 aa)
	ENSPMGP00000005112	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (209 aa)
	ENSPMGP00000006799	BRF1 RNA polymerase III transcription initiation factor subunit a. (606 aa)
	ENSPMGP00000006844	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (920 aa)
	ENSPMGP00000007193	Calcitonin gene-related peptide-receptor component protein. (147 aa)
	ENSPMGP00000007229	General transcription factor IIIC, polypeptide 4. (808 aa)
	ENSPMGP00000007238	General transcription factor IIIC, polypeptide 5. (511 aa)
	ENSPMGP00000008052	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. (484 aa)
	ENSPMGP00000008402	Nucleic_acid_bd domain-containing protein. (186 aa)
	ENSPMGP00000008418	Uncharacterized protein. (183 aa)
	ENSPMGP00000008434	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (99 aa)
	ENSPMGP00000008638	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
	ENSPMGP00000008685	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (185 aa)
	ENSPMGP00000008693	TAFH domain-containing protein. (915 aa)
	ENSPMGP00000008747	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
	ENSPMGP00000009265	Remodeling and spacing factor 1b, tandem duplicate 1. (1226 aa)
	ENSPMGP00000009969	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (242 aa)
	ENSPMGP00000010064	TAF4 domain-containing protein. (278 aa)
	ENSPMGP00000010352	Polymerase (RNA) II (DNA directed) polypeptide G-like. (175 aa)
	ENSPMGP00000011288	Partner of NOB1 homolog. (227 aa)
	ENSPMGP00000011999	Uncharacterized protein. (99 aa)
	ENSPMGP00000012073	GRIP and coiled-coil domain containing 1. (779 aa)
	ENSPMGP00000013470	General transcription factor IIB. (310 aa)
	ENSPMGP00000013868	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (96 aa)
	ENSPMGP00000014017	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1124 aa)
	ENSPMGP00000015665	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	ENSPMGP00000016157	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (165 aa)
	ENSPMGP00000016159	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (116 aa)
	ENSPMGP00000016272	Lipase, hormone-sensitive a. (705 aa)
	ENSPMGP00000017185	BRF2 RNA polymerase III transcription initiation factor subunit. (405 aa)
	ENSPMGP00000017510	Upstream binding transcription factor. (693 aa)
	GTF3C1	General transcription factor IIIC subunit 1. (1759 aa)
	ENSPMGP00000017796	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (777 aa)
	ENSPMGP00000017866	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1174 aa)
	ENSPMGP00000018241	TFIIF_beta domain-containing protein. (158 aa)
	ENSPMGP00000018480	Cyclin H; Belongs to the cyclin family. (314 aa)
	ENSPMGP00000019457	General transcription factor IIE, polypeptide 1, alpha. (433 aa)
	ENSPMGP00000019940	Polymerase (RNA) II (DNA directed) polypeptide I; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
	ENSPMGP00000020555	TFIIB-type domain-containing protein. (182 aa)
	ENSPMGP00000020803	Zgc:162472. (466 aa)
	H4C2	H4 clustered histone 2. (103 aa)
	ENSPMGP00000022094	Excision repair cross-complementation group 3. (780 aa)
	ENSPMGP00000022103	General transcription factor IIF, polypeptide 2a. (245 aa)
	ENSPMGP00000022193	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (354 aa)
	ENSPMGP00000022288	Polymerase (RNA) III (DNA directed) polypeptide H. (253 aa)
	ENSPMGP00000022338	TBP-like 1. (187 aa)
	ENSPMGP00000023085	Lipase, hormone-sensitive b. (838 aa)
	ENSPMGP00000023531	TWIST neighbor. (421 aa)
	ENSPMGP00000023707	HMG box domain-containing protein. (134 aa)
	ENSPMGP00000024005	Caveolae associated protein 1b. (463 aa)
	ENSPMGP00000024053	Transcription factor A, mitochondrial. (284 aa)
	ENSPMGP00000024747	Uncharacterized protein. (57 aa)
	ENSPMGP00000025406	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (227 aa)
	ENSPMGP00000025903	Uncharacterized protein. (112 aa)
	ENSPMGP00000026016	RPOL4c domain-containing protein. (109 aa)
	ENSPMGP00000026071	CBFD_NFYB_HMF domain-containing protein. (71 aa)
	CAVIN1	Caveolae associated protein 1a. (387 aa)
	ENSPMGP00000026851	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (100 aa)
	ENSPMGP00000027900	annotation not available (92 aa)
	ENSPMGP00000028789	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (266 aa)
	ENSPMGP00000029680	Elongin A. (189 aa)
	ENSPMGP00000030037	RNA polymerase I subunit E. (401 aa)

Your Current Organism:

Periophthalmus magnuspinnatus

NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMGP00000000039	ENSPMGP00000000185	ENSPMGP00000000039	ENSPMGP00000000185	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF4 domain-containing protein.	0.863
ENSPMGP00000000039	ENSPMGP00000000804	ENSPMGP00000000039	ENSPMGP00000000804	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	General transcription factor IIA, 1.	0.974
ENSPMGP00000000039	ENSPMGP00000001473	ENSPMGP00000000039	ENSPMGP00000001473	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.936
ENSPMGP00000000039	ENSPMGP00000001668	ENSPMGP00000000039	ENSPMGP00000001668	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TATA box binding protein.	0.970
ENSPMGP00000000039	ENSPMGP00000002085	ENSPMGP00000000039	ENSPMGP00000002085	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	General transcription factor IIA, 1-like.	0.974
ENSPMGP00000000039	ENSPMGP00000002864	ENSPMGP00000000039	ENSPMGP00000002864	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Upstream binding transcription factor, like.	0.657
ENSPMGP00000000039	ENSPMGP00000003161	ENSPMGP00000000039	ENSPMGP00000003161	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TBP-binding domain-containing protein.	0.983
ENSPMGP00000000039	ENSPMGP00000003695	ENSPMGP00000000039	ENSPMGP00000003695	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.928
ENSPMGP00000000039	ENSPMGP00000004832	ENSPMGP00000000039	ENSPMGP00000004832	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TATA box binding protein like 2.	0.970
ENSPMGP00000000039	ENSPMGP00000005067	ENSPMGP00000000039	ENSPMGP00000005067	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF domain-containing protein.	0.903
ENSPMGP00000000039	ENSPMGP00000005112	ENSPMGP00000000039	ENSPMGP00000005112	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.968
ENSPMGP00000000039	ENSPMGP00000006844	ENSPMGP00000000039	ENSPMGP00000006844	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.	0.953
ENSPMGP00000000039	ENSPMGP00000008418	ENSPMGP00000000039	ENSPMGP00000008418	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Uncharacterized protein.	0.965
ENSPMGP00000000039	ENSPMGP00000008434	ENSPMGP00000000039	ENSPMGP00000008434	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.638
ENSPMGP00000000039	ENSPMGP00000008638	ENSPMGP00000000039	ENSPMGP00000008638	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.638
ENSPMGP00000000039	ENSPMGP00000008685	ENSPMGP00000000039	ENSPMGP00000008685	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.909
ENSPMGP00000000039	ENSPMGP00000008693	ENSPMGP00000000039	ENSPMGP00000008693	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAFH domain-containing protein.	0.863
ENSPMGP00000000039	ENSPMGP00000008747	ENSPMGP00000000039	ENSPMGP00000008747	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.638
ENSPMGP00000000039	ENSPMGP00000009969	ENSPMGP00000000039	ENSPMGP00000009969	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.911
ENSPMGP00000000039	ENSPMGP00000010064	ENSPMGP00000000039	ENSPMGP00000010064	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF4 domain-containing protein.	0.863