(10 nodes) COPII vesicle coating network (Periophthalmus magnuspinnatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMGP00000010051	Programmed cell death 6. (121 aa)
	ENSPMGP00000005513	Uncharacterized protein. (161 aa)
	ENSPMGP00000005490	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (828 aa)
	ENSPMGP00000012682	CULLIN_2 domain-containing protein; Belongs to the cullin family. (771 aa)
	ENSPMGP00000018072	Prolactin regulatory element binding. (425 aa)
	CUL3	Cullin 3; Belongs to the cullin family. (758 aa)
	KLHL12	Kelch like family member 12. (564 aa)
	ENSPMGP00000022154	Penta-EF-hand domain containing 1. (294 aa)
	ENSPMGP00000012447	Trafficking from ER to golgi regulator. (374 aa)
	ENSPMGP00000007832	BTB domain-containing protein. (519 aa)

Your Current Organism:

Periophthalmus magnuspinnatus

NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUL3	ENSPMGP00000007832	ENSPMGP00000018252	ENSPMGP00000007832	Cullin 3; Belongs to the cullin family.	BTB domain-containing protein.	0.875
CUL3	ENSPMGP00000010051	ENSPMGP00000018252	ENSPMGP00000010051	Cullin 3; Belongs to the cullin family.	Programmed cell death 6.	0.472
CUL3	ENSPMGP00000012447	ENSPMGP00000018252	ENSPMGP00000012447	Cullin 3; Belongs to the cullin family.	Trafficking from ER to golgi regulator.	0.414
CUL3	ENSPMGP00000022154	ENSPMGP00000018252	ENSPMGP00000022154	Cullin 3; Belongs to the cullin family.	Penta-EF-hand domain containing 1.	0.487
CUL3	KLHL12	ENSPMGP00000018252	ENSPMGP00000019980	Cullin 3; Belongs to the cullin family.	Kelch like family member 12.	0.875
ENSPMGP00000005490	ENSPMGP00000012447	ENSPMGP00000005490	ENSPMGP00000012447	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Trafficking from ER to golgi regulator.	0.854
ENSPMGP00000005490	ENSPMGP00000018072	ENSPMGP00000005490	ENSPMGP00000018072	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Prolactin regulatory element binding.	0.699
ENSPMGP00000005513	ENSPMGP00000012447	ENSPMGP00000005513	ENSPMGP00000012447	Uncharacterized protein.	Trafficking from ER to golgi regulator.	0.850
ENSPMGP00000005513	ENSPMGP00000018072	ENSPMGP00000005513	ENSPMGP00000018072	Uncharacterized protein.	Prolactin regulatory element binding.	0.697
ENSPMGP00000007832	CUL3	ENSPMGP00000007832	ENSPMGP00000018252	BTB domain-containing protein.	Cullin 3; Belongs to the cullin family.	0.875
ENSPMGP00000007832	ENSPMGP00000010051	ENSPMGP00000007832	ENSPMGP00000010051	BTB domain-containing protein.	Programmed cell death 6.	0.487
ENSPMGP00000007832	ENSPMGP00000012682	ENSPMGP00000007832	ENSPMGP00000012682	BTB domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.875
ENSPMGP00000007832	ENSPMGP00000022154	ENSPMGP00000007832	ENSPMGP00000022154	BTB domain-containing protein.	Penta-EF-hand domain containing 1.	0.601
ENSPMGP00000010051	CUL3	ENSPMGP00000010051	ENSPMGP00000018252	Programmed cell death 6.	Cullin 3; Belongs to the cullin family.	0.472
ENSPMGP00000010051	ENSPMGP00000007832	ENSPMGP00000010051	ENSPMGP00000007832	Programmed cell death 6.	BTB domain-containing protein.	0.487
ENSPMGP00000010051	ENSPMGP00000012682	ENSPMGP00000010051	ENSPMGP00000012682	Programmed cell death 6.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.472
ENSPMGP00000010051	KLHL12	ENSPMGP00000010051	ENSPMGP00000019980	Programmed cell death 6.	Kelch like family member 12.	0.487
ENSPMGP00000012447	CUL3	ENSPMGP00000012447	ENSPMGP00000018252	Trafficking from ER to golgi regulator.	Cullin 3; Belongs to the cullin family.	0.414
ENSPMGP00000012447	ENSPMGP00000005490	ENSPMGP00000012447	ENSPMGP00000005490	Trafficking from ER to golgi regulator.	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	0.854
ENSPMGP00000012447	ENSPMGP00000005513	ENSPMGP00000012447	ENSPMGP00000005513	Trafficking from ER to golgi regulator.	Uncharacterized protein.	0.850