(24 nodes) Stem cell proliferation network (Periophthalmus magnuspinnatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMGP00000016189	MDS1 and EVI1 complex locus. (1040 aa)
	ENSPMGP00000011844	Uncharacterized protein. (461 aa)
	ENSPMGP00000009777	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (188 aa)
	ENSPMGP00000006593	Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
	ENSPMGP00000001878	Keratinocyte differentiation factor 1a. (364 aa)
	ENSPMGP00000003021	Isthmin 1. (422 aa)
	ENSPMGP00000003256	RBR-type E3 ubiquitin transferase. (448 aa)
	ENSPMGP00000027572	Zinc and ring finger 3. (857 aa)
	ENSPMGP00000027466	ANK_REP_REGION domain-containing protein. (136 aa)
	ENSPMGP00000027114	FZ domain-containing protein. (310 aa)
	ENSPMGP00000025399	Neurofibromin 1b. (2796 aa)
	ENSPMGP00000024284	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (722 aa)
	ENSPMGP00000023106	Methyltransferase like 3; Belongs to the MT-A70-like family. (562 aa)
	ENSPMGP00000022134	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (189 aa)
	ENSPMGP00000021539	Tripartite motif containing 71, E3 ubiquitin protein ligase. (828 aa)
	ENSPMGP00000018085	H6 family homeobox 2. (260 aa)
	ENSPMGP00000016491	RING-type domain-containing protein. (788 aa)
	ENSPMGP00000016417	DNA ligase. (913 aa)
	ENSPMGP00000000232	Excision repair cross-complementation group 2. (659 aa)
	ENSPMGP00000015741	Secreted frizzled-related protein 2. (294 aa)
	ENSPMGP00000015566	Uncharacterized protein; Belongs to the heparin-binding growth factors family. (69 aa)
	ENSPMGP00000004820	YTH N(6)-methyladenosine RNA binding protein 2. (632 aa)
	ENSPMGP00000004723	Bystin-like. (430 aa)
	ENSPMGP00000003590	Centrosomal protein 120. (922 aa)

Your Current Organism:

Periophthalmus magnuspinnatus

NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSPMGP00000000232	ENSPMGP00000016417	Excision repair cross-complementation group 2.	DNA ligase.	0.701
ENSPMGP00000000232	ENSPMGP00000024284	Excision repair cross-complementation group 2.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.567
ENSPMGP00000004820	ENSPMGP00000023106	YTH N(6)-methyladenosine RNA binding protein 2.	Methyltransferase like 3; Belongs to the MT-A70-like family.	0.475
ENSPMGP00000015741	ENSPMGP00000016491	Secreted frizzled-related protein 2.	RING-type domain-containing protein.	0.636
ENSPMGP00000015741	ENSPMGP00000027572	Secreted frizzled-related protein 2.	Zinc and ring finger 3.	0.588
ENSPMGP00000016417	ENSPMGP00000000232	DNA ligase.	Excision repair cross-complementation group 2.	0.701
ENSPMGP00000016417	ENSPMGP00000024284	DNA ligase.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.991
ENSPMGP00000016491	ENSPMGP00000015741	RING-type domain-containing protein.	Secreted frizzled-related protein 2.	0.636
ENSPMGP00000016491	ENSPMGP00000027114	RING-type domain-containing protein.	FZ domain-containing protein.	0.636
ENSPMGP00000016491	ENSPMGP00000027572	RING-type domain-containing protein.	Zinc and ring finger 3.	0.788
ENSPMGP00000023106	ENSPMGP00000004820	Methyltransferase like 3; Belongs to the MT-A70-like family.	YTH N(6)-methyladenosine RNA binding protein 2.	0.475
ENSPMGP00000024284	ENSPMGP00000000232	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	Excision repair cross-complementation group 2.	0.567
ENSPMGP00000024284	ENSPMGP00000016417	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	DNA ligase.	0.991
ENSPMGP00000027114	ENSPMGP00000016491	FZ domain-containing protein.	RING-type domain-containing protein.	0.636
ENSPMGP00000027114	ENSPMGP00000027572	FZ domain-containing protein.	Zinc and ring finger 3.	0.588
ENSPMGP00000027572	ENSPMGP00000015741	Zinc and ring finger 3.	Secreted frizzled-related protein 2.	0.588
ENSPMGP00000027572	ENSPMGP00000016491	Zinc and ring finger 3.	RING-type domain-containing protein.	0.788
ENSPMGP00000027572	ENSPMGP00000027114	Zinc and ring finger 3.	FZ domain-containing protein.	0.588