9 items (Periophthalmus magnuspinnatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMGP00000017792	Uncharacterized protein. (64 aa)
	ENSPMGP00000013503	Structural maintenance of chromosomes 5. (403 aa)
	ENSPMGP00000010809	Si:dkey-119f1.1. (880 aa)
	ENSPMGP00000003215	NSE1 homolog, SMC5-SMC6 complex component. (248 aa)
	ENSPMGP00000017795	RanBD1 domain-containing protein. (202 aa)
	ENSPMGP00000017802	Uncharacterized protein. (434 aa)
	ENSPMGP00000022158	RAN GTPase activating protein 1a. (557 aa)
	ENSPMGP00000026625	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (222 aa)
	ENSPMGP00000027736	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (327 aa)

Your Current Organism:

Periophthalmus magnuspinnatus

NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSPMGP00000003215	ENSPMGP00000010809	NSE1 homolog, SMC5-SMC6 complex component.	Si:dkey-119f1.1.	0.999
ENSPMGP00000003215	ENSPMGP00000013503	NSE1 homolog, SMC5-SMC6 complex component.	Structural maintenance of chromosomes 5.	0.999
ENSPMGP00000003215	ENSPMGP00000026625	NSE1 homolog, SMC5-SMC6 complex component.	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.	0.999
ENSPMGP00000003215	ENSPMGP00000027736	NSE1 homolog, SMC5-SMC6 complex component.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.999
ENSPMGP00000010809	ENSPMGP00000003215	Si:dkey-119f1.1.	NSE1 homolog, SMC5-SMC6 complex component.	0.999
ENSPMGP00000010809	ENSPMGP00000013503	Si:dkey-119f1.1.	Structural maintenance of chromosomes 5.	0.999
ENSPMGP00000010809	ENSPMGP00000026625	Si:dkey-119f1.1.	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.	0.999
ENSPMGP00000010809	ENSPMGP00000027736	Si:dkey-119f1.1.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.999
ENSPMGP00000013503	ENSPMGP00000003215	Structural maintenance of chromosomes 5.	NSE1 homolog, SMC5-SMC6 complex component.	0.999
ENSPMGP00000013503	ENSPMGP00000010809	Structural maintenance of chromosomes 5.	Si:dkey-119f1.1.	0.999
ENSPMGP00000013503	ENSPMGP00000026625	Structural maintenance of chromosomes 5.	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.	0.999
ENSPMGP00000013503	ENSPMGP00000027736	Structural maintenance of chromosomes 5.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.999
ENSPMGP00000017792	ENSPMGP00000017795	Uncharacterized protein.	RanBD1 domain-containing protein.	0.913
ENSPMGP00000017792	ENSPMGP00000017802	Uncharacterized protein.	Uncharacterized protein.	0.913
ENSPMGP00000017792	ENSPMGP00000022158	Uncharacterized protein.	RAN GTPase activating protein 1a.	0.999
ENSPMGP00000017795	ENSPMGP00000017792	RanBD1 domain-containing protein.	Uncharacterized protein.	0.913
ENSPMGP00000017795	ENSPMGP00000017802	RanBD1 domain-containing protein.	Uncharacterized protein.	0.913
ENSPMGP00000017795	ENSPMGP00000022158	RanBD1 domain-containing protein.	RAN GTPase activating protein 1a.	0.999
ENSPMGP00000017802	ENSPMGP00000017792	Uncharacterized protein.	Uncharacterized protein.	0.913
ENSPMGP00000017802	ENSPMGP00000017795	Uncharacterized protein.	RanBD1 domain-containing protein.	0.913