6 items (Periophthalmus magnuspinnatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMGP00000020495	Uncharacterized protein. (84 aa)
	ENSPMGP00000011352	Uncharacterized protein. (145 aa)
	ENSPMGP00000009425	Uncharacterized protein. (76 aa)
	ENSPMGP00000008582	Endothelin 2. (161 aa)
	ENSPMGP00000007847	END domain-containing protein. (172 aa)
	ENSPMGP00000005266	Uncharacterized protein. (140 aa)

Your Current Organism:

Periophthalmus magnuspinnatus

NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSPMGP00000005266	ENSPMGP00000007847	Uncharacterized protein.	END domain-containing protein.	0.891
ENSPMGP00000005266	ENSPMGP00000008582	Uncharacterized protein.	Endothelin 2.	0.862
ENSPMGP00000005266	ENSPMGP00000009425	Uncharacterized protein.	Uncharacterized protein.	0.827
ENSPMGP00000005266	ENSPMGP00000011352	Uncharacterized protein.	Uncharacterized protein.	0.870
ENSPMGP00000005266	ENSPMGP00000020495	Uncharacterized protein.	Uncharacterized protein.	0.827
ENSPMGP00000007847	ENSPMGP00000005266	END domain-containing protein.	Uncharacterized protein.	0.891
ENSPMGP00000007847	ENSPMGP00000008582	END domain-containing protein.	Endothelin 2.	0.856
ENSPMGP00000007847	ENSPMGP00000009425	END domain-containing protein.	Uncharacterized protein.	0.812
ENSPMGP00000007847	ENSPMGP00000020495	END domain-containing protein.	Uncharacterized protein.	0.816
ENSPMGP00000008582	ENSPMGP00000005266	Endothelin 2.	Uncharacterized protein.	0.862
ENSPMGP00000008582	ENSPMGP00000007847	Endothelin 2.	END domain-containing protein.	0.856
ENSPMGP00000008582	ENSPMGP00000009425	Endothelin 2.	Uncharacterized protein.	0.812
ENSPMGP00000008582	ENSPMGP00000011352	Endothelin 2.	Uncharacterized protein.	0.842
ENSPMGP00000008582	ENSPMGP00000020495	Endothelin 2.	Uncharacterized protein.	0.823
ENSPMGP00000009425	ENSPMGP00000005266	Uncharacterized protein.	Uncharacterized protein.	0.827
ENSPMGP00000009425	ENSPMGP00000007847	Uncharacterized protein.	END domain-containing protein.	0.812
ENSPMGP00000009425	ENSPMGP00000008582	Uncharacterized protein.	Endothelin 2.	0.812
ENSPMGP00000009425	ENSPMGP00000011352	Uncharacterized protein.	Uncharacterized protein.	0.698
ENSPMGP00000009425	ENSPMGP00000020495	Uncharacterized protein.	Uncharacterized protein.	0.825
ENSPMGP00000011352	ENSPMGP00000005266	Uncharacterized protein.	Uncharacterized protein.	0.870