17 items (Periophthalmus magnuspinnatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMGP00000001535	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family. (594 aa)
	SIRT5	NAD-dependent protein deacylase sirtuin-5, mitochondrial; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo. (307 aa)
	ENSPMGP00000003566	Sirtuin 6. (339 aa)
	ENSPMGP00000008125	Electron transfer flavoprotein subunit alpha. (364 aa)
	ENSPMGP00000010836	Sirtuin 1. (693 aa)
	ENSPMGP00000012339	NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily. (307 aa)
	ENSPMGP00000014334	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family. (460 aa)
	ENSPMGP00000016299	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (372 aa)
	ENSPMGP00000016594	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (344 aa)
	ENSPMGP00000020229	Sirtuin 7. (401 aa)
	ENSPMGP00000024369	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (337 aa)
	ENSPMGP00000027437	Deacetylase sirtuin-type domain-containing protein. (159 aa)
	ENSPMGP00000028306	Deoxyhypusine synthase. (359 aa)
	ENSPMGP00000028388	Uncharacterized protein. (290 aa)
	ENSPMGP00000028389	Uncharacterized protein. (270 aa)
	ENSPMGP00000029296	Nicotinamide nucleotide transhydrogenase 2. (942 aa)
	ENSPMGP00000029747	Nicotinamide nucleotide transhydrogenase. (962 aa)

Your Current Organism:

Periophthalmus magnuspinnatus

NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMGP00000003566	ENSPMGP00000010836	ENSPMGP00000003566	ENSPMGP00000010836	Sirtuin 6.	Sirtuin 1.	0.934
ENSPMGP00000003566	ENSPMGP00000012339	ENSPMGP00000003566	ENSPMGP00000012339	Sirtuin 6.	NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily.	0.927
ENSPMGP00000003566	ENSPMGP00000016299	ENSPMGP00000003566	ENSPMGP00000016299	Sirtuin 6.	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.	0.881
ENSPMGP00000003566	ENSPMGP00000016594	ENSPMGP00000003566	ENSPMGP00000016594	Sirtuin 6.	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.	0.878
ENSPMGP00000003566	ENSPMGP00000020229	ENSPMGP00000003566	ENSPMGP00000020229	Sirtuin 6.	Sirtuin 7.	0.861
ENSPMGP00000003566	ENSPMGP00000024369	ENSPMGP00000003566	ENSPMGP00000024369	Sirtuin 6.	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.	0.879
ENSPMGP00000003566	ENSPMGP00000027437	ENSPMGP00000003566	ENSPMGP00000027437	Sirtuin 6.	Deacetylase sirtuin-type domain-containing protein.	0.944
ENSPMGP00000003566	ENSPMGP00000029296	ENSPMGP00000003566	ENSPMGP00000029296	Sirtuin 6.	Nicotinamide nucleotide transhydrogenase 2.	0.822
ENSPMGP00000003566	ENSPMGP00000029747	ENSPMGP00000003566	ENSPMGP00000029747	Sirtuin 6.	Nicotinamide nucleotide transhydrogenase.	0.822
ENSPMGP00000003566	SIRT5	ENSPMGP00000003566	ENSPMGP00000001963	Sirtuin 6.	NAD-dependent protein deacylase sirtuin-5, mitochondrial; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.	0.929
ENSPMGP00000010836	ENSPMGP00000003566	ENSPMGP00000010836	ENSPMGP00000003566	Sirtuin 1.	Sirtuin 6.	0.934
ENSPMGP00000010836	ENSPMGP00000012339	ENSPMGP00000010836	ENSPMGP00000012339	Sirtuin 1.	NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily.	0.901
ENSPMGP00000010836	ENSPMGP00000016299	ENSPMGP00000010836	ENSPMGP00000016299	Sirtuin 1.	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.	0.928
ENSPMGP00000010836	ENSPMGP00000016594	ENSPMGP00000010836	ENSPMGP00000016594	Sirtuin 1.	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.	0.913
ENSPMGP00000010836	ENSPMGP00000020229	ENSPMGP00000010836	ENSPMGP00000020229	Sirtuin 1.	Sirtuin 7.	0.946
ENSPMGP00000010836	ENSPMGP00000024369	ENSPMGP00000010836	ENSPMGP00000024369	Sirtuin 1.	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.	0.913
ENSPMGP00000010836	ENSPMGP00000027437	ENSPMGP00000010836	ENSPMGP00000027437	Sirtuin 1.	Deacetylase sirtuin-type domain-containing protein.	0.890
ENSPMGP00000010836	ENSPMGP00000029296	ENSPMGP00000010836	ENSPMGP00000029296	Sirtuin 1.	Nicotinamide nucleotide transhydrogenase 2.	0.824
ENSPMGP00000010836	ENSPMGP00000029747	ENSPMGP00000010836	ENSPMGP00000029747	Sirtuin 1.	Nicotinamide nucleotide transhydrogenase.	0.824
ENSPMGP00000010836	SIRT5	ENSPMGP00000010836	ENSPMGP00000001963	Sirtuin 1.	NAD-dependent protein deacylase sirtuin-5, mitochondrial; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.	0.849