5 items (Periophthalmus magnuspinnatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMGP00000026286	RAN binding protein 1. (212 aa)
	ENSPMGP00000020585	Nucleoporin 50. (405 aa)
	ENSPMGP00000017795	RanBD1 domain-containing protein. (202 aa)
	ENSPMGP00000017802	Uncharacterized protein. (434 aa)
	ENSPMGP00000017937	RAN binding protein 3b. (503 aa)

Your Current Organism:

Periophthalmus magnuspinnatus

NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSPMGP00000017795	ENSPMGP00000017802	RanBD1 domain-containing protein.	Uncharacterized protein.	0.913
ENSPMGP00000017795	ENSPMGP00000017937	RanBD1 domain-containing protein.	RAN binding protein 3b.	0.414
ENSPMGP00000017795	ENSPMGP00000020585	RanBD1 domain-containing protein.	Nucleoporin 50.	0.989
ENSPMGP00000017795	ENSPMGP00000026286	RanBD1 domain-containing protein.	RAN binding protein 1.	0.823
ENSPMGP00000017802	ENSPMGP00000017795	Uncharacterized protein.	RanBD1 domain-containing protein.	0.913
ENSPMGP00000017802	ENSPMGP00000017937	Uncharacterized protein.	RAN binding protein 3b.	0.414
ENSPMGP00000017802	ENSPMGP00000020585	Uncharacterized protein.	Nucleoporin 50.	0.989
ENSPMGP00000017802	ENSPMGP00000026286	Uncharacterized protein.	RAN binding protein 1.	0.817
ENSPMGP00000017937	ENSPMGP00000017795	RAN binding protein 3b.	RanBD1 domain-containing protein.	0.414
ENSPMGP00000017937	ENSPMGP00000017802	RAN binding protein 3b.	Uncharacterized protein.	0.414
ENSPMGP00000017937	ENSPMGP00000020585	RAN binding protein 3b.	Nucleoporin 50.	0.771
ENSPMGP00000017937	ENSPMGP00000026286	RAN binding protein 3b.	RAN binding protein 1.	0.655
ENSPMGP00000020585	ENSPMGP00000017795	Nucleoporin 50.	RanBD1 domain-containing protein.	0.989
ENSPMGP00000020585	ENSPMGP00000017802	Nucleoporin 50.	Uncharacterized protein.	0.989
ENSPMGP00000020585	ENSPMGP00000017937	Nucleoporin 50.	RAN binding protein 3b.	0.771
ENSPMGP00000020585	ENSPMGP00000026286	Nucleoporin 50.	RAN binding protein 1.	0.832
ENSPMGP00000026286	ENSPMGP00000017795	RAN binding protein 1.	RanBD1 domain-containing protein.	0.823
ENSPMGP00000026286	ENSPMGP00000017802	RAN binding protein 1.	Uncharacterized protein.	0.817
ENSPMGP00000026286	ENSPMGP00000017937	RAN binding protein 1.	RAN binding protein 3b.	0.655
ENSPMGP00000026286	ENSPMGP00000020585	RAN binding protein 1.	Nucleoporin 50.	0.832