23 items (Periophthalmus magnuspinnatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMGP00000000464	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (210 aa)
	ENSPMGP00000001523	Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family. (65 aa)
	ENSPMGP00000005183	Translocase of inner mitochondrial membrane 9 homolog. (88 aa)
	ENSPMGP00000007794	Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family. (107 aa)
	ENSPMGP00000009319	Translocase of inner mitochondrial membrane 10 homolog B (yeast). (191 aa)
	ENSPMGP00000010224	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (228 aa)
	ENSPMGP00000010320	Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (168 aa)
	ENSPMGP00000012438	Translocase of inner mitochondrial membrane 8 homolog B (yeast); Belongs to the small Tim family. (89 aa)
	ENY2-2	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (95 aa)
	ENSPMGP00000015594	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. (431 aa)
	ENY2	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (104 aa)
	ENSPMGP00000019454	Plug_translocon domain-containing protein. (417 aa)
	ENSPMGP00000019995	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (876 aa)
	ENSPMGP00000020419	Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family. (66 aa)
	ENSPMGP00000020944	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (788 aa)
	ENSPMGP00000022473	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (620 aa)
	ENSPMGP00000024166	Translocase of inner mitochondrial membrane 10 homolog (yeast). (88 aa)
	ENSPMGP00000025799	Translocase of inner mitochondrial membrane 8 homolog A (yeast); Belongs to the small Tim family. (96 aa)
	ENSPMGP00000025836	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (96 aa)
	ENSPMGP00000025978	Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family. (64 aa)
	ENSPMGP00000028373	Translocating chain-associated membrane protein; Belongs to the TRAM family. (364 aa)
	ENSPMGP00000028472	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (300 aa)
	ENSPMGP00000029911	Plug_translocon domain-containing protein. (410 aa)

Your Current Organism:

Periophthalmus magnuspinnatus

NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSPMGP00000000464	ENSPMGP00000005183	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 9 homolog.	0.925
ENSPMGP00000000464	ENSPMGP00000007794	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.	0.948
ENSPMGP00000000464	ENSPMGP00000009319	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 10 homolog B (yeast).	0.845
ENSPMGP00000000464	ENSPMGP00000010224	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.994
ENSPMGP00000000464	ENSPMGP00000010320	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.993
ENSPMGP00000000464	ENSPMGP00000012438	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 8 homolog B (yeast); Belongs to the small Tim family.	0.859
ENSPMGP00000000464	ENSPMGP00000015594	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.980
ENSPMGP00000000464	ENSPMGP00000024166	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 10 homolog (yeast).	0.913
ENSPMGP00000000464	ENSPMGP00000025799	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 8 homolog A (yeast); Belongs to the small Tim family.	0.860
ENSPMGP00000001523	ENSPMGP00000025836	Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.739
ENSPMGP00000005183	ENSPMGP00000000464	Translocase of inner mitochondrial membrane 9 homolog.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.925
ENSPMGP00000005183	ENSPMGP00000007794	Translocase of inner mitochondrial membrane 9 homolog.	Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.	0.938
ENSPMGP00000005183	ENSPMGP00000009319	Translocase of inner mitochondrial membrane 9 homolog.	Translocase of inner mitochondrial membrane 10 homolog B (yeast).	0.986
ENSPMGP00000005183	ENSPMGP00000010224	Translocase of inner mitochondrial membrane 9 homolog.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.557
ENSPMGP00000005183	ENSPMGP00000010320	Translocase of inner mitochondrial membrane 9 homolog.	Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.839
ENSPMGP00000005183	ENSPMGP00000012438	Translocase of inner mitochondrial membrane 9 homolog.	Translocase of inner mitochondrial membrane 8 homolog B (yeast); Belongs to the small Tim family.	0.904
ENSPMGP00000005183	ENSPMGP00000015594	Translocase of inner mitochondrial membrane 9 homolog.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.510
ENSPMGP00000005183	ENSPMGP00000024166	Translocase of inner mitochondrial membrane 9 homolog.	Translocase of inner mitochondrial membrane 10 homolog (yeast).	0.999
ENSPMGP00000005183	ENSPMGP00000025799	Translocase of inner mitochondrial membrane 9 homolog.	Translocase of inner mitochondrial membrane 8 homolog A (yeast); Belongs to the small Tim family.	0.923
ENSPMGP00000007794	ENSPMGP00000000464	Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.948