STRINGSTRING
ENSPMGP00000018791 ENSPMGP00000018791 ENSPMGP00000018316 ENSPMGP00000018316 CPSF3 CPSF3 ENSPMGP00000019142 ENSPMGP00000019142 ENSPMGP00000019320 ENSPMGP00000019320 LSM10 LSM10 ENSPMGP00000019578 ENSPMGP00000019578 ENSPMGP00000019793 ENSPMGP00000019793 ENSPMGP00000019835 ENSPMGP00000019835 ENSPMGP00000019843 ENSPMGP00000019843 ENSPMGP00000020018 ENSPMGP00000020018 ENSPMGP00000020160 ENSPMGP00000020160 ENSPMGP00000029626 ENSPMGP00000029626 ENSPMGP00000028548 ENSPMGP00000028548 ENSPMGP00000027484 ENSPMGP00000027484 ENSPMGP00000027287 ENSPMGP00000027287 ENSPMGP00000027106 ENSPMGP00000027106 ENSPMGP00000027005 ENSPMGP00000027005 ENSPMGP00000027003 ENSPMGP00000027003 ENSPMGP00000026960 ENSPMGP00000026960 ENSPMGP00000026819 ENSPMGP00000026819 SRSF5 SRSF5 ENSPMGP00000025842 ENSPMGP00000025842 ENSPMGP00000025650 ENSPMGP00000025650 NCBP1 NCBP1 ENSPMGP00000024880 ENSPMGP00000024880 ENSPMGP00000024660 ENSPMGP00000024660 RNPS1 RNPS1 ENSPMGP00000022187 ENSPMGP00000022187 ENSPMGP00000022001 ENSPMGP00000022001 ENSPMGP00000021950 ENSPMGP00000021950 ENSPMGP00000021903 ENSPMGP00000021903 ENSPMGP00000021012 ENSPMGP00000021012 ENSPMGP00000021011 ENSPMGP00000021011 ENSPMGP00000021008 ENSPMGP00000021008 ENSPMGP00000020522 ENSPMGP00000020522 ENSPMGP00000020433 ENSPMGP00000020433 ENSPMGP00000020239 ENSPMGP00000020239 ENSPMGP00000000150 ENSPMGP00000000150 ENSPMGP00000000427 ENSPMGP00000000427 ENSPMGP00000001046 ENSPMGP00000001046 ENSPMGP00000001048 ENSPMGP00000001048 ENSPMGP00000001053 ENSPMGP00000001053 ENSPMGP00000001259 ENSPMGP00000001259 U2AF1L5 U2AF1L5 ENSPMGP00000002633 ENSPMGP00000002633 ENSPMGP00000002868 ENSPMGP00000002868 ENSPMGP00000002871 ENSPMGP00000002871 ENSPMGP00000002872 ENSPMGP00000002872 ENSPMGP00000003088 ENSPMGP00000003088 ENSPMGP00000003114 ENSPMGP00000003114 ENSPMGP00000004437 ENSPMGP00000004437 SRSF3 SRSF3 CPSF7 CPSF7 ENSPMGP00000006001 ENSPMGP00000006001 ENSPMGP00000006002 ENSPMGP00000006002 ENSPMGP00000006804 ENSPMGP00000006804 ENSPMGP00000007206 ENSPMGP00000007206 ENSPMGP00000007292 ENSPMGP00000007292 ENSPMGP00000007409 ENSPMGP00000007409 ENSPMGP00000007849 ENSPMGP00000007849 ENSPMGP00000007873 ENSPMGP00000007873 ENSPMGP00000008286 ENSPMGP00000008286 ENSPMGP00000009801 ENSPMGP00000009801 ENSPMGP00000009869 ENSPMGP00000009869 ENSPMGP00000010000 ENSPMGP00000010000 ENSPMGP00000010827 ENSPMGP00000010827 ENSPMGP00000010897 ENSPMGP00000010897 ENSPMGP00000011089 ENSPMGP00000011089 ENSPMGP00000011092 ENSPMGP00000011092 ENSPMGP00000011267 ENSPMGP00000011267 ENSPMGP00000011384 ENSPMGP00000011384 ENSPMGP00000011456 ENSPMGP00000011456 ENSPMGP00000012267 ENSPMGP00000012267 ENSPMGP00000012383 ENSPMGP00000012383 ENSPMGP00000012632 ENSPMGP00000012632 WDR25 WDR25 ENSPMGP00000013238 ENSPMGP00000013238 CLP1 CLP1 ENSPMGP00000015840 ENSPMGP00000015840 ENSPMGP00000015849 ENSPMGP00000015849 ENSPMGP00000016197 ENSPMGP00000016197 SRSF4 SRSF4 PABPN1L PABPN1L ENSPMGP00000017226 ENSPMGP00000017226
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPMGP00000018791Lactamase_B domain-containing protein. (132 aa)
ENSPMGP00000018316Serine and arginine rich splicing factor 6a. (333 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (401 aa)
ENSPMGP00000019142Mago homolog, exon junction complex subunit. (147 aa)
ENSPMGP00000019320SLU7 homolog, splicing factor. (537 aa)
LSM10LSM10, U7 small nuclear RNA associated. (77 aa)
ENSPMGP00000019578RNA binding protein S1, serine-rich domain. (273 aa)
ENSPMGP00000019793THO complex 6. (323 aa)
ENSPMGP00000019835Uncharacterized protein. (130 aa)
ENSPMGP00000019843UPF3B regulator of nonsense mediated mRNA decay. (274 aa)
ENSPMGP00000020018Serine and arginine rich splicing factor 9. (251 aa)
ENSPMGP00000020160CID domain-containing protein. (87 aa)
ENSPMGP00000029626Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
ENSPMGP00000028548U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (444 aa)
ENSPMGP00000027484CPSF_A domain-containing protein. (216 aa)
ENSPMGP00000027287Poly(A) binding protein, nuclear 1. (272 aa)
ENSPMGP00000027106Serine and arginine rich splicing factor 7a. (145 aa)
ENSPMGP00000027005THO complex 5. (330 aa)
ENSPMGP00000027003THO complex 5. (331 aa)
ENSPMGP00000026960Uncharacterized protein. (434 aa)
ENSPMGP00000026819Serine and arginine rich splicing factor 5b. (149 aa)
SRSF5Serine and arginine rich splicing factor 5. (131 aa)
ENSPMGP00000025842Uncharacterized protein. (594 aa)
ENSPMGP00000025650LSM11, U7 small nuclear RNA associated. (311 aa)
NCBP1Nuclear cap binding protein subunit 1. (788 aa)
ENSPMGP00000024880Serine and arginine rich splicing factor 5a. (334 aa)
ENSPMGP00000024660Zinc finger CCCH-type containing 11A. (618 aa)
RNPS1RNA binding protein with serine rich domain 1. (177 aa)
ENSPMGP00000022187THO complex 3. (322 aa)
ENSPMGP00000022001Q_MOTIF domain-containing protein. (98 aa)
ENSPMGP00000021950annotation not available (110 aa)
ENSPMGP00000021903Cleavage and polyadenylation specific factor 4. (230 aa)
ENSPMGP00000021012Splicing regulatory glutamine/lysine-rich protein 1. (168 aa)
ENSPMGP00000021011FIP1 like 1b (S. cerevisiae). (524 aa)
ENSPMGP00000021008RRM domain-containing protein. (115 aa)
ENSPMGP00000020522Aly/REF export factor. (294 aa)
ENSPMGP00000020433DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa. (427 aa)
ENSPMGP00000020239Small nuclear ribonucleoprotein-associated protein. (233 aa)
ENSPMGP00000000150Cleavage stimulation factor, 3' pre-RNA, subunit 3. (548 aa)
ENSPMGP00000000427Chromatin target of PRMT1a. (195 aa)
ENSPMGP00000001046Uncharacterized protein. (259 aa)
ENSPMGP00000001048RRM domain-containing protein. (106 aa)
ENSPMGP00000001053Serine and arginine rich splicing factor 11. (253 aa)
ENSPMGP00000001259THO complex 7. (203 aa)
U2AF1L5U2 small nuclear RNA auxiliary factor 1 like 5. (231 aa)
ENSPMGP00000002633Uncharacterized protein. (130 aa)
ENSPMGP00000002868Cleavage and polyadenylation specificity factor subunit 2. (64 aa)
ENSPMGP00000002871Cleavage and polyadenylation specificity factor subunit 2. (601 aa)
ENSPMGP00000002872WD repeat domain 33. (287 aa)
ENSPMGP00000003088Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (238 aa)
ENSPMGP00000003114THO complex 2. (1428 aa)
ENSPMGP00000004437Symplekin. (618 aa)
SRSF3Serine and arginine rich splicing factor 3. (211 aa)
CPSF7Uncharacterized protein. (394 aa)
ENSPMGP00000006001RRM domain-containing protein. (114 aa)
ENSPMGP00000006002Uncharacterized protein. (343 aa)
ENSPMGP00000006804Uncharacterized protein. (242 aa)
ENSPMGP00000007206Uncharacterized protein. (92 aa)
ENSPMGP00000007292DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1212 aa)
ENSPMGP00000007409Uncharacterized protein. (580 aa)
ENSPMGP00000007849Cleavage stimulation factor, 3' pre-RNA, subunit 1. (335 aa)
ENSPMGP00000007873Cleavage stimulation factor, 3' pre-RNA, subunit 2. (514 aa)
ENSPMGP00000008286RRM domain-containing protein. (167 aa)
ENSPMGP00000009801Stem-loop binding protein 2. (199 aa)
ENSPMGP00000009869Tumor protein p63 regulated 1-like. (275 aa)
ENSPMGP00000010000THO complex 1. (629 aa)
ENSPMGP00000010827Cell division cycle 40 homolog (S. cerevisiae). (558 aa)
ENSPMGP00000010897PWI domain-containing protein. (232 aa)
ENSPMGP00000011089SAP domain containing ribonucleoprotein. (113 aa)
ENSPMGP00000011092SAP domain-containing protein. (47 aa)
ENSPMGP00000011267Uncharacterized protein. (257 aa)
ENSPMGP00000011384Eukaryotic translation initiation factor 4A3. (156 aa)
ENSPMGP00000011456Polymerase (DNA-directed), delta interacting protein 3. (365 aa)
ENSPMGP00000012267RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (175 aa)
ENSPMGP00000012383RRM domain-containing protein. (155 aa)
ENSPMGP00000012632Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (392 aa)
WDR25WD repeat domain 25. (467 aa)
ENSPMGP00000013238Serine and arginine rich splicing factor 2a. (208 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (440 aa)
ENSPMGP00000015840Uncharacterized protein. (212 aa)
ENSPMGP00000015849RRM domain-containing protein. (168 aa)
ENSPMGP00000016197Serine and arginine rich splicing factor 1a. (252 aa)
SRSF4Serine and arginine rich splicing factor 4. (316 aa)
PABPN1LPoly(A) binding protein nuclear 1 like, cytoplasmic. (222 aa)
ENSPMGP00000017226Tumor protein p63 regulated 1. (226 aa)
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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