11 items (Periophthalmus magnuspinnatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMGP00000018008	Uncharacterized protein. (461 aa)
	ENSPMGP00000003935	Epidermal growth factor receptor pathway substrate 15-like 1a. (809 aa)
	ENSPMGP00000002296	Uncharacterized protein. (490 aa)
	ENSPMGP00000000838	Intersectin 2a. (1038 aa)
	EHD2	EH-domain containing 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (550 aa)
	ENSPMGP00000022321	EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (545 aa)
	ENSPMGP00000027416	Epidermal growth factor receptor pathway substrate 15. (760 aa)
	ENSPMGP00000016636	RALBP1 associated Eps domain containing 1. (775 aa)
	ENSPMGP00000016184	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (544 aa)
	ENSPMGP00000016880	Intersectin 1 (SH3 domain protein). (968 aa)
	ENSPMGP00000009515	EH-domain containing 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)

Your Current Organism:

Periophthalmus magnuspinnatus

NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSPMGP00000000838	ENSPMGP00000002296	Intersectin 2a.	Uncharacterized protein.	0.989
ENSPMGP00000000838	ENSPMGP00000003935	Intersectin 2a.	Epidermal growth factor receptor pathway substrate 15-like 1a.	0.999
ENSPMGP00000000838	ENSPMGP00000016636	Intersectin 2a.	RALBP1 associated Eps domain containing 1.	0.990
ENSPMGP00000000838	ENSPMGP00000016880	Intersectin 2a.	Intersectin 1 (SH3 domain protein).	0.986
ENSPMGP00000000838	ENSPMGP00000018008	Intersectin 2a.	Uncharacterized protein.	0.999
ENSPMGP00000000838	ENSPMGP00000027416	Intersectin 2a.	Epidermal growth factor receptor pathway substrate 15.	0.999
ENSPMGP00000002296	ENSPMGP00000000838	Uncharacterized protein.	Intersectin 2a.	0.989
ENSPMGP00000002296	ENSPMGP00000003935	Uncharacterized protein.	Epidermal growth factor receptor pathway substrate 15-like 1a.	0.999
ENSPMGP00000002296	ENSPMGP00000016636	Uncharacterized protein.	RALBP1 associated Eps domain containing 1.	0.990
ENSPMGP00000002296	ENSPMGP00000016880	Uncharacterized protein.	Intersectin 1 (SH3 domain protein).	0.987
ENSPMGP00000002296	ENSPMGP00000018008	Uncharacterized protein.	Uncharacterized protein.	0.999
ENSPMGP00000002296	ENSPMGP00000027416	Uncharacterized protein.	Epidermal growth factor receptor pathway substrate 15.	0.999
ENSPMGP00000003935	ENSPMGP00000000838	Epidermal growth factor receptor pathway substrate 15-like 1a.	Intersectin 2a.	0.999
ENSPMGP00000003935	ENSPMGP00000002296	Epidermal growth factor receptor pathway substrate 15-like 1a.	Uncharacterized protein.	0.999
ENSPMGP00000003935	ENSPMGP00000016636	Epidermal growth factor receptor pathway substrate 15-like 1a.	RALBP1 associated Eps domain containing 1.	0.725
ENSPMGP00000003935	ENSPMGP00000016880	Epidermal growth factor receptor pathway substrate 15-like 1a.	Intersectin 1 (SH3 domain protein).	0.960
ENSPMGP00000003935	ENSPMGP00000027416	Epidermal growth factor receptor pathway substrate 15-like 1a.	Epidermal growth factor receptor pathway substrate 15.	0.818
ENSPMGP00000016636	ENSPMGP00000000838	RALBP1 associated Eps domain containing 1.	Intersectin 2a.	0.990
ENSPMGP00000016636	ENSPMGP00000002296	RALBP1 associated Eps domain containing 1.	Uncharacterized protein.	0.990
ENSPMGP00000016636	ENSPMGP00000003935	RALBP1 associated Eps domain containing 1.	Epidermal growth factor receptor pathway substrate 15-like 1a.	0.725