Your Input: | |
| | CDV56_107210 | Uncharacterized protein. (699 aa) |
| | CDV56_108498 | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (290 aa) |
| | CDV56_109407 | NmrA domain-containing protein. (319 aa) |
| | CDV56_108408 | CID domain-containing protein. (414 aa) |
| | MCM7 | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (814 aa) |
| | CDV56_104804 | Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (518 aa) |
| | CDV56_107524 | Uncharacterized protein. (811 aa) |
| | CDV56_108963 | Uncharacterized protein. (472 aa) |
| | CDV56_108205 | Uncharacterized protein. (1670 aa) |
| | CDV56_109386 | Uncharacterized protein. (299 aa) |
| | CDV56_109323 | Uncharacterized protein. (392 aa) |
| | CDV56_108735 | Uncharacterized protein. (1163 aa) |
| | CDV56_108188 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (574 aa) |
| | CDV56_107179 | Chitin-binding type-4 domain-containing protein. (509 aa) |
| | CDV56_109476 | Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (696 aa) |
| | RVB2 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (469 aa) |
| | CDV56_108176 | Uncharacterized protein. (1028 aa) |
| | CDV56_105500 | Uncharacterized protein. (250 aa) |
| | YAF9 | NuA4 histone H4 acetyltransferase complex and the SWR1 complex subunit. (252 aa) |
| | CDV56_107706 | RPOL4c domain-containing protein. (148 aa) |
| | CDV56_108334 | Uncharacterized protein. (909 aa) |
| | CDV56_104990 | B30.2/SPRY domain-containing protein. (617 aa) |
| | CDV56_101474 | Uncharacterized protein. (693 aa) |
| | CDV56_108521 | Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (869 aa) |
| | CDV56_108713 | zf-C3H1 domain-containing protein. (1305 aa) |
| | CDV56_104114 | Uncharacterized protein. (1270 aa) |
| | CDV56_108481 | Uncharacterized protein. (313 aa) |
| | CDV56_106345 | Uncharacterized protein. (205 aa) |
| | CDV56_102687 | Uncharacterized protein. (234 aa) |
| | CDV56_108146 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (480 aa) |
| | CDV56_108888 | Uncharacterized protein. (570 aa) |
| | CDV56_106232 | BTP domain-containing protein. (215 aa) |
| | CDV56_108946 | PHD domain-containing protein. (608 aa) |
| | CDV56_108733 | Uncharacterized protein. (522 aa) |
| | NMD3 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (533 aa) |
| | NOP7 | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (676 aa) |
| | SPT5 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1035 aa) |
| | CDV56_108505 | Uncharacterized protein. (427 aa) |
| | SET1 | Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation. (1242 aa) |
| | CDV56_108335 | Uncharacterized protein. (1199 aa) |
| | CDV56_105654 | NmrA domain-containing protein. (305 aa) |
| | ARP6 | Actin-protein 6; Belongs to the actin family. (468 aa) |
| | CDV56_104502 | DNA helicase; Belongs to the MCM family. (1023 aa) |
| | CDV56_105651 | Uncharacterized protein. (348 aa) |
| | NOG2 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (561 aa) |
| | CDV56_108614 | C2H2-type domain-containing protein. (920 aa) |
| | CDV56_107040 | WD_REPEATS_REGION domain-containing protein. (635 aa) |
| | CDV56_108898 | PWWP domain-containing protein. (612 aa) |
| | CDV56_106868 | Uncharacterized protein. (1479 aa) |
| | CDV56_105449 | Uncharacterized protein. (382 aa) |
| | CDV56_107493 | UmuC domain-containing protein. (595 aa) |
| | SWR1 | Swr1 complex component. (1694 aa) |
| | CDV56_105846 | Uncharacterized protein. (436 aa) |
| | CDV56_107574 | WD_REPEATS_REGION domain-containing protein. (551 aa) |
| | CDV56_106307 | TAFII55_N domain-containing protein. (485 aa) |
| | CDV56_104751 | RING-type domain-containing protein. (379 aa) |
| | CDV56_108653 | Uncharacterized protein. (423 aa) |
| | YTM1 | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (488 aa) |
| | CDV56_102900 | DNA helicase; Belongs to the MCM family. (957 aa) |
| | CDV56_106508 | Uncharacterized protein. (624 aa) |
| | CDV56_107289 | SGF29 C-terminal domain-containing protein. (488 aa) |
| | CDV56_108290 | Uncharacterized protein. (327 aa) |
| | CDV56_107742 | DNA helicase; Belongs to the MCM family. (889 aa) |
| | CDV56_108345 | Uncharacterized protein. (374 aa) |
| | CDV56_100513 | DUF3591 domain-containing protein. (1387 aa) |
| | FEN1 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (401 aa) |
| | CDV56_107011 | RING-type domain-containing protein. (970 aa) |
| | SWC4 | Swr complex subunit. (596 aa) |
| | CDV56_105138 | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3881 aa) |
| | EAF1 | Chromatin modification-protein VID21. (1467 aa) |
| | CDV56_107044 | SIS domain-containing protein. (633 aa) |
| | CDV56_105977 | TFIID_20kDa domain-containing protein. (617 aa) |
| | CDV56_108362 | Uncharacterized protein. (277 aa) |
| | MCM5 | DNA helicase; Belongs to the MCM family. (719 aa) |
| | CDV56_108412 | Uncharacterized protein. (442 aa) |
| | ESA1 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (510 aa) |
| | CDV56_106497 | Uncharacterized protein. (167 aa) |
| | CDV56_101503 | RPOLD domain-containing protein. (336 aa) |
| | CDV56_100343 | SAGA-associated factor 11; Functions as component of the transcription regulatory histone acetylation (HAT) complex SAGA. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA [...] (348 aa) |
| | CDV56_107861 | Uncharacterized protein. (637 aa) |
| | CDV56_102120 | Hist_deacetyl domain-containing protein. (696 aa) |
| | CDV56_108177 | TAF domain-containing protein. (445 aa) |
| | CDV56_104133 | DUF4211 domain-containing protein. (467 aa) |
| | CDV56_106348 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (459 aa) |
| | CDV56_107214 | YL1_C domain-containing protein. (747 aa) |
| | CDV56_106316 | Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (801 aa) |
| | HTZ1 | Histone H2A; Belongs to the histone H2A family. (138 aa) |
| | CDV56_100648 | HECT domain-containing protein. (1816 aa) |
| | CDV56_105787 | Lactamase_B domain-containing protein. (312 aa) |
| | CDV56_102803 | GFA domain-containing protein. (154 aa) |
| | SSL2 | DNA repair helicase RAD25. (823 aa) |
| | CDV56_104351 | Protein kinase domain-containing protein. (1092 aa) |
| | CDV56_107810 | BTB domain-containing protein. (813 aa) |
| | CDV56_103244 | G-patch domain-containing protein. (547 aa) |
| | CDV56_105461 | Uncharacterized protein. (386 aa) |
| | CDV56_105120 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (914 aa) |
| | CDV56_107138 | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (278 aa) |
| | CDV56_105976 | Uncharacterized protein. (828 aa) |
| | CDV56_105438 | NmrA domain-containing protein. (302 aa) |
| | CDV56_103930 | WD_REPEATS_REGION domain-containing protein. (371 aa) |
| | CDV56_105912 | Plus3 domain-containing protein. (608 aa) |
| | CDV56_103060 | Uncharacterized protein. (730 aa) |
| | CDV56_105231 | GH16 domain-containing protein. (391 aa) |
| | CDV56_102954 | Cnn_1N domain-containing protein. (979 aa) |
| | CDV56_104973 | Uncharacterized protein. (708 aa) |
| | CDV56_102326 | DUF1767 domain-containing protein. (249 aa) |
| | CDV56_105473 | Uncharacterized protein. (440 aa) |
| | CDV56_103349 | TYR_PHOSPHATASE_2 domain-containing protein. (608 aa) |
| | CDV56_107379 | NET domain-containing protein. (232 aa) |
| | CDV56_103679 | CULLIN_2 domain-containing protein; Belongs to the cullin family. (2550 aa) |
| | PSF3 | DNA replication protein. (193 aa) |
| | CDV56_101947 | Uncharacterized protein. (288 aa) |
| | CDV56_103645 | Importin subunit alpha; Belongs to the importin alpha family. (552 aa) |
| | CDV56_101062 | Uncharacterized protein. (431 aa) |
| | CDV56_101215 | Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4926 aa) |
| | CDV56_105021 | Uncharacterized protein. (1490 aa) |
| | CDV56_103296 | SRP40_C domain-containing protein. (425 aa) |
| | SPT4 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (122 aa) |
| | CDV56_104572 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (487 aa) |
| | CDV56_103573 | CID domain-containing protein. (240 aa) |
| | CDV56_106374 | GFA domain-containing protein. (163 aa) |
| | CDV56_103515 | Fungal_trans domain-containing protein. (881 aa) |
| | CDV56_104389 | Uncharacterized protein. (775 aa) |
| | CDV56_104388 | SHNi-TPR domain-containing protein. (463 aa) |
| | CDV56_105866 | Uncharacterized protein. (822 aa) |
| | CDV56_101960 | Uncharacterized protein. (745 aa) |
| | CDV56_106256 | Uncharacterized protein. (506 aa) |
| | CDV56_105277 | Uncharacterized protein. (357 aa) |
| | SPB4 | RNA helicase. (640 aa) |
| | CDV56_106557 | RNase_PH domain-containing protein. (414 aa) |
| | CDV56_105662 | Uncharacterized protein; Belongs to the cyclin family. (393 aa) |
| | CDV56_102103 | Uncharacterized protein. (846 aa) |
| | ARP4 | NuA4 histone acetyltransferase subunit; Belongs to the actin family. (472 aa) |
| | EAF3 | Esa1p-associated factor. (330 aa) |
| | CDV56_105655 | Uncharacterized protein. (349 aa) |
| | TFB5 | TFIIH complex subunit tfb5. (72 aa) |
| | CDV56_103820 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (404 aa) |
| | RVB1 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (458 aa) |
| | CDV56_100542 | Uncharacterized protein. (376 aa) |
| | CDV56_106381 | TAFII28 domain-containing protein. (356 aa) |
| | CDV56_100659 | Uncharacterized protein. (640 aa) |
| | CDV56_106136 | APH domain-containing protein. (292 aa) |
| | CDV56_103453 | Uncharacterized protein. (311 aa) |
| | CDV56_100755 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (598 aa) |
| | TOA2 | Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa) |
| | CDV56_102258 | AAA domain-containing protein. (706 aa) |
| | CDV56_102961 | Uncharacterized protein. (287 aa) |
| | CDV56_103182 | PAPA-1 domain-containing protein. (322 aa) |
| | CDV56_101882 | ORC_WH_C domain-containing protein. (699 aa) |
| | CDV56_100804 | Uncharacterized protein. (393 aa) |
| | EPL1 | Enhancer of polycomb-like protein. (591 aa) |
| | CDV56_105085 | Uncharacterized protein. (161 aa) |
| | MCM2 | DNA helicase; Belongs to the MCM family. (896 aa) |
| | CDV56_104243 | Uncharacterized protein. (455 aa) |
| | CDV56_101048 | Uncharacterized protein. (330 aa) |
| | CDV56_104399 | Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (104 aa) |
| | CDV56_100669 | WD_REPEATS_REGION domain-containing protein. (479 aa) |
| | CDV56_103915 | RNA_pol_L_2 domain-containing protein. (179 aa) |
| | RAD15 | DNA-dependent ATPase of the nucleotide excision repair factor 4 complex. (794 aa) |
| | CDV56_101034 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (145 aa) |
| | CDV56_101063 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2625 aa) |
| | CDV56_103215 | Uncharacterized protein. (343 aa) |
| | CDV56_104308 | GFA domain-containing protein. (144 aa) |
| | RPB2 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa) |
| | CDV56_101979 | Bromo domain-containing protein. (1182 aa) |
| | CDV56_104095 | Helicase C-terminal domain-containing protein. (328 aa) |
| | CDV56_100994 | Uncharacterized protein. (1112 aa) |
| | CDV56_100545 | Uncharacterized protein. (772 aa) |
| | CDV56_103466 | Uncharacterized protein. (933 aa) |
| | CDV56_101924 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1058 aa) |
| | CDV56_101409 | Uncharacterized protein. (665 aa) |
| | CDV56_101921 | Uncharacterized protein. (310 aa) |
| | CDV56_102782 | Uncharacterized protein. (126 aa) |
| | CDV56_100163 | Uncharacterized protein. (507 aa) |
| | CDV56_103583 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (373 aa) |
| | CDV56_100004 | CDC73_C domain-containing protein. (376 aa) |
| | CDV56_101741 | Uncharacterized protein. (2300 aa) |
| | CDV56_100640 | SET domain-containing protein. (927 aa) |
| | CDV56_101075 | RTC domain-containing protein. (437 aa) |
| | CDV56_100276 | Helicase ATP-binding domain-containing protein. (465 aa) |
| | CDV56_100209 | Uncharacterized protein. (581 aa) |
| | CDV56_102030 | PHD-type domain-containing protein. (861 aa) |
| | CDV56_100843 | SLD3 domain-containing protein. (936 aa) |
| | SPT16 | FACT complex subunit spt16. (1019 aa) |
| | CDV56_100262 | C2H2-type domain-containing protein. (728 aa) |
| | CDV56_101523 | Uncharacterized protein. (203 aa) |
| | CDV56_100482 | Uncharacterized protein. (723 aa) |
| | CDV56_100277 | VWFA domain-containing protein. (254 aa) |
| | CDV56_100003 | Helicase C-terminal domain-containing protein. (211 aa) |
| | CDV56_100227 | C2H2-type domain-containing protein. (1059 aa) |
| | PSF1 | DNA replication protein psf1. (215 aa) |
| | CDV56_109225 | Uncharacterized protein. (396 aa) |
| | CDV56_109597 | PHD-type domain-containing protein. (831 aa) |
| | GCN5 | Histone acetyltransferase. (408 aa) |
| | CDV56_109612 | HRDC domain-containing protein. (769 aa) |
| | CDV56_107943 | Cell division control protein; Belongs to the CDC6/cdc18 family. (638 aa) |
| | CDV56_109582 | ENDO3c domain-containing protein. (384 aa) |
| | CDV56_104068 | Uncharacterized protein. (450 aa) |
| | CDV56_108003 | HTH TFE/IIEalpha-type domain-containing protein. (440 aa) |
| | CDV56_108209 | RXT2_N domain-containing protein. (511 aa) |
| | CDV56_109686 | U1-type domain-containing protein. (291 aa) |
| | CDV56_105195 | WD_REPEATS_REGION domain-containing protein. (430 aa) |
| | CDV56_109676 | Uncharacterized protein. (68 aa) |
| | CDV56_109693 | Uncharacterized protein. (346 aa) |
| | CDV56_103254 | Uncharacterized protein. (765 aa) |
| | ERB1 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (790 aa) |
| | CDV56_108642 | Uncharacterized protein. (89 aa) |
| | POB3 | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (598 aa) |
| | CDV56_108480 | Uncharacterized protein. (402 aa) |
| | CDV56_109576 | Uncharacterized protein. (512 aa) |
| | CDV56_104030 | AAA_16 domain-containing protein. (542 aa) |
| | CDV56_106188 | Uncharacterized protein. (798 aa) |
| | CDV56_107343 | RPOL9 domain-containing protein. (122 aa) |
| | CDV56_109463 | Lactamase_B domain-containing protein. (391 aa) |
| | CDV56_104576 | Uncharacterized protein. (373 aa) |
| | CDV56_101024 | Uncharacterized protein. (342 aa) |
| | CDV56_109410 | Uncharacterized protein. (860 aa) |
