STRINGSTRING
SWC4 SWC4 CDV56_107289 CDV56_107289 ELP3 ELP3 CDV56_101685 CDV56_101685 RVB2 RVB2 CDV56_109400 CDV56_109400 CDV56_108735 CDV56_108735 CDV56_109486 CDV56_109486 CDV56_104078 CDV56_104078 CDV56_103215 CDV56_103215 CDV56_100804 CDV56_100804 CDV56_103182 CDV56_103182 CDV56_101499 CDV56_101499 EAF3 EAF3 CDV56_101133 CDV56_101133 HAT1 HAT1 CDV56_101947 CDV56_101947 HTB1 HTB1 CDV56_107774 CDV56_107774 NCB2 NCB2 CDV56_105165 CDV56_105165 CDV56_107214 CDV56_107214 CDV56_107758 CDV56_107758 CDV56_106721 CDV56_106721 CDV56_105052 CDV56_105052
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SWC4Swr complex subunit. (596 aa)
CDV56_107289SGF29 C-terminal domain-containing protein. (488 aa)
ELP3Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (576 aa)
CDV56_101685Uncharacterized protein. (227 aa)
RVB2RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (469 aa)
CDV56_109400BZIP domain-containing protein. (564 aa)
CDV56_108735Uncharacterized protein. (1163 aa)
CDV56_109486BZIP domain-containing protein. (327 aa)
CDV56_104078CBFD_NFYB_HMF domain-containing protein. (216 aa)
CDV56_103215Uncharacterized protein. (343 aa)
CDV56_100804Uncharacterized protein. (393 aa)
CDV56_103182PAPA-1 domain-containing protein. (322 aa)
CDV56_101499Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (99 aa)
EAF3Esa1p-associated factor. (330 aa)
CDV56_101133Uncharacterized protein. (215 aa)
HAT1Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (509 aa)
CDV56_101947Uncharacterized protein. (288 aa)
HTB1Histone H2B; Belongs to the histone H2B family. (140 aa)
CDV56_107774Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
NCB2Negative cofactor 2 transcription regulator complex subunit ncb2. (142 aa)
CDV56_105165BZIP domain-containing protein. (300 aa)
CDV56_107214YL1_C domain-containing protein. (747 aa)
CDV56_107758Uncharacterized protein. (1666 aa)
CDV56_106721Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. (1326 aa)
CDV56_105052Uncharacterized protein. (311 aa)
Your Current Organism:
Aspergillus thermomutatus
NCBI taxonomy Id: 41047
Other names: A. thermomutatus, Aspergillus fischeri var. thermomutatus, CBS 208.92, NRRL 20748, Neosartorya pseudofischeri
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.