60 items (Aspergillus thermomutatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CDV56_109386	Uncharacterized protein. (299 aa)
	CDV56_108963	Uncharacterized protein. (472 aa)
	CDV56_108498	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (290 aa)
	CDV56_107210	Uncharacterized protein. (699 aa)
	CDV56_109157	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (831 aa)
	CDV56_109391	Uncharacterized protein; Belongs to the cyclin family. (568 aa)
	CDV56_107343	RPOL9 domain-containing protein. (122 aa)
	POB3	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (598 aa)
	CDV56_109665	TPR_REGION domain-containing protein. (399 aa)
	CDV56_103254	Uncharacterized protein. (765 aa)
	CDV56_109676	Uncharacterized protein. (68 aa)
	NCBP2	Nuclear cap-binding protein subunit 2. (176 aa)
	CDV56_108003	HTH TFE/IIEalpha-type domain-containing protein. (440 aa)
	CDV56_109280	Uncharacterized protein. (264 aa)
	CDV56_103025	TFIIB-type domain-containing protein. (350 aa)
	CDV56_109597	PHD-type domain-containing protein. (831 aa)
	CDV56_104243	Uncharacterized protein. (455 aa)
	CDV56_103915	RNA_pol_L_2 domain-containing protein. (179 aa)
	RAD15	DNA-dependent ATPase of the nucleotide excision repair factor 4 complex. (794 aa)
	CDV56_101034	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (145 aa)
	CDV56_101063	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2625 aa)
	RPB2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)
	CDV56_101921	Uncharacterized protein. (310 aa)
	CDV56_102782	Uncharacterized protein. (126 aa)
	CDV56_100004	CDC73_C domain-containing protein. (376 aa)
	CDV56_100209	Uncharacterized protein. (581 aa)
	SPT16	FACT complex subunit spt16. (1019 aa)
	CDV56_100277	VWFA domain-containing protein. (254 aa)
	CDV56_105085	Uncharacterized protein. (161 aa)
	CDV56_102961	Uncharacterized protein. (287 aa)
	TOA2	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
	CDV56_106381	TAFII28 domain-containing protein. (356 aa)
	CDV56_100542	Uncharacterized protein. (376 aa)
	CDV56_103820	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (404 aa)
	TFB5	TFIIH complex subunit tfb5. (72 aa)
	CDV56_105662	Uncharacterized protein; Belongs to the cyclin family. (393 aa)
	CDV56_103715	TcA_TcB_BD domain-containing protein. (189 aa)
	SPT4	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (122 aa)
	CDV56_101062	Uncharacterized protein. (431 aa)
	SPT6	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1421 aa)
	CDV56_105912	Plus3 domain-containing protein. (608 aa)
	SSL2	DNA repair helicase RAD25. (823 aa)
	CDV56_104133	DUF4211 domain-containing protein. (467 aa)
	CDV56_108177	TAF domain-containing protein. (445 aa)
	CDV56_101503	RPOLD domain-containing protein. (336 aa)
	CDV56_106497	Uncharacterized protein. (167 aa)
	CDV56_105977	TFIID_20kDa domain-containing protein. (617 aa)
	CDV56_100513	DUF3591 domain-containing protein. (1387 aa)
	CDV56_108345	Uncharacterized protein. (374 aa)
	CDV56_106301	Uncharacterized protein. (507 aa)
	CDV56_104751	RING-type domain-containing protein. (379 aa)
	CDV56_106307	TAFII55_N domain-containing protein. (485 aa)
	CDV56_108335	Uncharacterized protein. (1199 aa)
	SPT5	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1035 aa)
	CDV56_108146	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (480 aa)
	CDV56_102687	Uncharacterized protein. (234 aa)
	CDV56_104114	Uncharacterized protein. (1270 aa)
	IWS1	Transcription factor iws1. (452 aa)
	CDV56_101474	Uncharacterized protein. (693 aa)
	CDV56_107706	RPOL4c domain-containing protein. (148 aa)

Your Current Organism:

Aspergillus thermomutatus

NCBI taxonomy Id: 41047
Other names: A. thermomutatus, Aspergillus fischeri var. thermomutatus, CBS 208.92, NRRL 20748, Neosartorya pseudofischeri

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDV56_100004	CDV56_101034	A0A397G1D7	A0A397G6D7	CDC73_C domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.941
CDV56_100004	CDV56_101063	A0A397G1D7	A0A397G5H2	CDC73_C domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.981
CDV56_100004	CDV56_101503	A0A397G1D7	A0A397H2Y3	CDC73_C domain-containing protein.	RPOLD domain-containing protein.	0.935
CDV56_100004	CDV56_102687	A0A397G1D7	A0A397HJM2	CDC73_C domain-containing protein.	Uncharacterized protein.	0.939
CDV56_100004	CDV56_103025	A0A397G1D7	A0A397I2H7	CDC73_C domain-containing protein.	TFIIB-type domain-containing protein.	0.437
CDV56_100004	CDV56_103915	A0A397G1D7	A0A397G6P0	CDC73_C domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.928
CDV56_100004	CDV56_105085	A0A397G1D7	A0A397G8H7	CDC73_C domain-containing protein.	Uncharacterized protein.	0.930
CDV56_100004	CDV56_105662	A0A397G1D7	A0A397GHC5	CDC73_C domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.471
CDV56_100004	CDV56_105912	A0A397G1D7	A0A397GSU4	CDC73_C domain-containing protein.	Plus3 domain-containing protein.	0.996
CDV56_100004	CDV56_106301	A0A397G1D7	A0A397H810	CDC73_C domain-containing protein.	Uncharacterized protein.	0.886
CDV56_100004	CDV56_106497	A0A397G1D7	A0A397H464	CDC73_C domain-containing protein.	Uncharacterized protein.	0.933
CDV56_100004	CDV56_107210	A0A397G1D7	A0A397HV22	CDC73_C domain-containing protein.	Uncharacterized protein.	0.430
CDV56_100004	CDV56_107343	A0A397G1D7	A0A397HWS3	CDC73_C domain-containing protein.	RPOL9 domain-containing protein.	0.932
CDV56_100004	CDV56_107706	A0A397G1D7	A0A397HQ86	CDC73_C domain-containing protein.	RPOL4c domain-containing protein.	0.917
CDV56_100004	CDV56_108335	A0A397G1D7	A0A397HHU0	CDC73_C domain-containing protein.	Uncharacterized protein.	0.998
CDV56_100004	CDV56_108345	A0A397G1D7	A0A397H7Z9	CDC73_C domain-containing protein.	Uncharacterized protein.	0.479
CDV56_100004	CDV56_108963	A0A397G1D7	A0A397HT66	CDC73_C domain-containing protein.	Uncharacterized protein.	0.999
CDV56_100004	CDV56_109391	A0A397G1D7	A0A397HWC5	CDC73_C domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.665
CDV56_100004	CDV56_109676	A0A397G1D7	A0A397I025	CDC73_C domain-containing protein.	Uncharacterized protein.	0.915
CDV56_100004	IWS1	A0A397G1D7	A0A397HMK3	CDC73_C domain-containing protein.	Transcription factor iws1.	0.705