43 items (Aspergillus thermomutatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CDV56_101921	Uncharacterized protein. (310 aa)
	CDV56_102782	Uncharacterized protein. (126 aa)
	CDV56_100209	Uncharacterized protein. (581 aa)
	RPB2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)
	CDV56_100277	VWFA domain-containing protein. (254 aa)
	CDV56_101063	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2625 aa)
	CDV56_101034	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (145 aa)
	RAD15	DNA-dependent ATPase of the nucleotide excision repair factor 4 complex. (794 aa)
	CDV56_103915	RNA_pol_L_2 domain-containing protein. (179 aa)
	CDV56_104243	Uncharacterized protein. (455 aa)
	CDV56_105085	Uncharacterized protein. (161 aa)
	CDV56_102961	Uncharacterized protein. (287 aa)
	TOA2	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
	CDV56_106381	TAFII28 domain-containing protein. (356 aa)
	CDV56_100542	Uncharacterized protein. (376 aa)
	CDV56_103820	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (404 aa)
	TFB5	TFIIH complex subunit tfb5. (72 aa)
	CDV56_101062	Uncharacterized protein. (431 aa)
	SSL2	DNA repair helicase RAD25. (823 aa)
	CDV56_104133	DUF4211 domain-containing protein. (467 aa)
	CDV56_108177	TAF domain-containing protein. (445 aa)
	CDV56_101503	RPOLD domain-containing protein. (336 aa)
	CDV56_106497	Uncharacterized protein. (167 aa)
	CDV56_105977	TFIID_20kDa domain-containing protein. (617 aa)
	CDV56_100513	DUF3591 domain-containing protein. (1387 aa)
	CDV56_108345	Uncharacterized protein. (374 aa)
	CDV56_106301	Uncharacterized protein. (507 aa)
	CDV56_104751	RING-type domain-containing protein. (379 aa)
	CDV56_106307	TAFII55_N domain-containing protein. (485 aa)
	CDV56_108146	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (480 aa)
	CDV56_102687	Uncharacterized protein. (234 aa)
	CDV56_104114	Uncharacterized protein. (1270 aa)
	CDV56_101474	Uncharacterized protein. (693 aa)
	CDV56_107706	RPOL4c domain-containing protein. (148 aa)
	CDV56_109386	Uncharacterized protein. (299 aa)
	CDV56_108498	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (290 aa)
	CDV56_107343	RPOL9 domain-containing protein. (122 aa)
	CDV56_103254	Uncharacterized protein. (765 aa)
	CDV56_109676	Uncharacterized protein. (68 aa)
	CDV56_108003	HTH TFE/IIEalpha-type domain-containing protein. (440 aa)
	CDV56_109280	Uncharacterized protein. (264 aa)
	CDV56_103025	TFIIB-type domain-containing protein. (350 aa)
	CDV56_109597	PHD-type domain-containing protein. (831 aa)

Your Current Organism:

Aspergillus thermomutatus

NCBI taxonomy Id: 41047
Other names: A. thermomutatus, Aspergillus fischeri var. thermomutatus, CBS 208.92, NRRL 20748, Neosartorya pseudofischeri

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDV56_100209	CDV56_100277	A0A397FZM6	A0A397FWR5	Uncharacterized protein.	VWFA domain-containing protein.	0.998
CDV56_100209	CDV56_100513	A0A397FZM6	A0A397H7I9	Uncharacterized protein.	DUF3591 domain-containing protein.	0.875
CDV56_100209	CDV56_100542	A0A397FZM6	A0A397GDX7	Uncharacterized protein.	Uncharacterized protein.	0.949
CDV56_100209	CDV56_101034	A0A397FZM6	A0A397G6D7	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.974
CDV56_100209	CDV56_101062	A0A397FZM6	A0A397GM85	Uncharacterized protein.	Uncharacterized protein.	0.971
CDV56_100209	CDV56_101063	A0A397FZM6	A0A397G5H2	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.982
CDV56_100209	CDV56_101474	A0A397FZM6	A0A397HML0	Uncharacterized protein.	Uncharacterized protein.	0.958
CDV56_100209	CDV56_101503	A0A397FZM6	A0A397H2Y3	Uncharacterized protein.	RPOLD domain-containing protein.	0.976
CDV56_100209	CDV56_101921	A0A397FZM6	A0A397G321	Uncharacterized protein.	Uncharacterized protein.	0.878
CDV56_100209	CDV56_102687	A0A397FZM6	A0A397HJM2	Uncharacterized protein.	Uncharacterized protein.	0.974
CDV56_100209	CDV56_102782	A0A397FZM6	A0A397G2M3	Uncharacterized protein.	Uncharacterized protein.	0.958
CDV56_100209	CDV56_102961	A0A397FZM6	A0A397GAU5	Uncharacterized protein.	Uncharacterized protein.	0.879
CDV56_100209	CDV56_103025	A0A397FZM6	A0A397I2H7	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.980
CDV56_100209	CDV56_103254	A0A397FZM6	A0A397HZ44	Uncharacterized protein.	Uncharacterized protein.	0.875
CDV56_100209	CDV56_103820	A0A397FZM6	A0A397GF61	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.985
CDV56_100209	CDV56_103915	A0A397FZM6	A0A397G6P0	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.974
CDV56_100209	CDV56_104114	A0A397FZM6	A0A397HL30	Uncharacterized protein.	Uncharacterized protein.	0.891
CDV56_100209	CDV56_104133	A0A397FZM6	A0A397H0Y9	Uncharacterized protein.	DUF4211 domain-containing protein.	0.822
CDV56_100209	CDV56_104243	A0A397FZM6	A0A397G7G8	Uncharacterized protein.	Uncharacterized protein.	0.974
CDV56_100209	CDV56_104751	A0A397FZM6	A0A397HBG7	Uncharacterized protein.	RING-type domain-containing protein.	0.997