(64 nodes) Porphyrin and chlorophyll metabolism network (Aspergillus thermomutatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CDV56_107961	Uncharacterized protein. (339 aa)
	CDV56_109407	NmrA domain-containing protein. (319 aa)
	CDV56_108983	Uncharacterized protein. (333 aa)
	CDV56_109572	Uncharacterized protein. (714 aa)
	ATG26	Sterol 3-beta-glucosyltransferase. (1415 aa)
	HEM2	Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (299 aa)
	CDV56_109639	AB hydrolase-1 domain-containing protein. (445 aa)
	CDV56_109654	Glyco_transf_28 domain-containing protein. (695 aa)
	CDV56_100036	NAD(P)-bd_dom domain-containing protein. (252 aa)
	CDV56_102189	Zn(2)-C6 fungal-type domain-containing protein. (393 aa)
	CDV56_100680	Lactamase_B domain-containing protein. (298 aa)
	CDV56_102190	Zn(2)-C6 fungal-type domain-containing protein. (412 aa)
	CDV56_102518	MFS domain-containing protein; Belongs to the ferrochelatase family. (1011 aa)
	DJP1	DnaJ-like protein 1. (81 aa)
	CDV56_101301	Glyco_transf_28 domain-containing protein. (813 aa)
	CDV56_101309	tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (603 aa)
	ERF2	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (607 aa)
	HEM12	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (353 aa)
	CDV56_105258	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (715 aa)
	CDV56_100852	Uncharacterized protein. (655 aa)
	CDV56_101118	Glyco_transf_28 domain-containing protein. (1004 aa)
	CDV56_105277	Uncharacterized protein. (357 aa)
	CDV56_103515	Fungal_trans domain-containing protein. (881 aa)
	CDV56_103472	Uncharacterized protein. (246 aa)
	CDV56_102730	F-box domain-containing protein. (534 aa)
	CDV56_103436	Uncharacterized protein. (319 aa)
	FMA1	Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (401 aa)
	CDV56_101221	Uncharacterized protein. (548 aa)
	CDV56_102711	Uncharacterized protein. (540 aa)
	CDV56_102398	J domain-containing protein. (441 aa)
	CDV56_104787	Uncharacterized protein. (1048 aa)
	CDV56_103401	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (640 aa)
	CDV56_101829	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (330 aa)
	CDV56_105438	NmrA domain-containing protein. (302 aa)
	CDV56_107718	DnaJ-X domain-containing protein. (286 aa)
	CDV56_102796	Uncharacterized protein. (520 aa)
	CDV56_106587	NmrA domain-containing protein. (313 aa)
	CDV56_107020	Uncharacterized protein. (532 aa)
	CDV56_106411	Uncharacterized protein. (203 aa)
	CDV56_102016	Zn(2)-C6 fungal-type domain-containing protein. (394 aa)
	CDV56_103175	Uncharacterized protein; Belongs to the precorrin methyltransferase family. (564 aa)
	CDV56_100853	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (444 aa)
	CDV56_108051	NAD(P)-bd_dom domain-containing protein. (244 aa)
	CDV56_105902	Uncharacterized protein. (112 aa)
	YAH1	Mitochondrial matrix iron-sulfur protein. (162 aa)
	CDV56_104278	Uncharacterized protein. (235 aa)
	CDV56_106563	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (287 aa)
	CDV56_102920	Uncharacterized protein. (286 aa)
	CDV56_105038	AB hydrolase-1 domain-containing protein. (421 aa)
	CDV56_101423	NmrA domain-containing protein. (322 aa)
	CDV56_106499	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (603 aa)
	CDV56_107120	Uncharacterized protein. (341 aa)
	CDV56_108520	HEM4 domain-containing protein. (338 aa)
	CDV56_101589	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (462 aa)
	CDV56_101485	Uncharacterized protein. (89 aa)
	CDV56_107835	Uncharacterized protein. (263 aa)
	CDV56_108528	PEP_hydrolase domain-containing protein. (596 aa)
	CDV56_105749	Uncharacterized protein. (523 aa)
	CDV56_105654	NmrA domain-containing protein. (305 aa)
	COX10	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. (518 aa)
	CDV56_108483	Peptidase_M24 domain-containing protein. (405 aa)
	CDV56_109224	NAD(P)-bd_dom domain-containing protein. (269 aa)
	CDV56_105801	Uncharacterized protein. (341 aa)
	CDV56_109428	Uncharacterized protein. (118 aa)

Your Current Organism:

Aspergillus thermomutatus

NCBI taxonomy Id: 41047
Other names: A. thermomutatus, Aspergillus fischeri var. thermomutatus, CBS 208.92, NRRL 20748, Neosartorya pseudofischeri

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG26	CDV56_100852	A0A397HYE3	A0A397GET1	Sterol 3-beta-glucosyltransferase.	Uncharacterized protein.	0.458
CDV56_100036	CDV56_108483	A0A397G0I0	A0A397HJF5	NAD(P)-bd_dom domain-containing protein.	Peptidase_M24 domain-containing protein.	0.496
CDV56_100036	ERF2	A0A397G0I0	A0A397G8E4	NAD(P)-bd_dom domain-containing protein.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.465
CDV56_100680	CDV56_103472	A0A397G3M7	A0A397GKR4	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.784
CDV56_100680	CDV56_105749	A0A397G3M7	A0A397HG73	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.453
CDV56_100680	COX10	A0A397G3M7	A0A397HI22	Lactamase_B domain-containing protein.	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	0.771
CDV56_100852	ATG26	A0A397GET1	A0A397HYE3	Uncharacterized protein.	Sterol 3-beta-glucosyltransferase.	0.458
CDV56_100852	CDV56_101118	A0A397GET1	A0A397GGV8	Uncharacterized protein.	Glyco_transf_28 domain-containing protein.	0.458
CDV56_100852	CDV56_101301	A0A397GET1	A0A397G6J1	Uncharacterized protein.	Glyco_transf_28 domain-containing protein.	0.458
CDV56_100852	CDV56_101485	A0A397GET1	A0A397HFQ4	Uncharacterized protein.	Uncharacterized protein.	0.458
CDV56_100852	CDV56_102711	A0A397GET1	A0A397GQQ5	Uncharacterized protein.	Uncharacterized protein.	0.458
CDV56_100852	CDV56_102796	A0A397GET1	A0A397GWM8	Uncharacterized protein.	Uncharacterized protein.	0.458
CDV56_100852	CDV56_106411	A0A397GET1	A0A397GXY3	Uncharacterized protein.	Uncharacterized protein.	0.458
CDV56_100852	CDV56_107020	A0A397GET1	A0A397GXU9	Uncharacterized protein.	Uncharacterized protein.	0.458
CDV56_100852	CDV56_109572	A0A397GET1	A0A397HWK2	Uncharacterized protein.	Uncharacterized protein.	0.458
CDV56_100852	CDV56_109654	A0A397GET1	A0A397I552	Uncharacterized protein.	Glyco_transf_28 domain-containing protein.	0.458
CDV56_100853	CDV56_101221	A0A397H349	A0A397GQJ0	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Uncharacterized protein.	0.688
CDV56_100853	CDV56_101309	A0A397H349	A0A397G764	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.551
CDV56_100853	CDV56_102016	A0A397H349	A0A397GY07	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Zn(2)-C6 fungal-type domain-containing protein.	0.688
CDV56_100853	CDV56_102189	A0A397H349	A0A397G2L0	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Zn(2)-C6 fungal-type domain-containing protein.	0.688